Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Use1Q9CQ56 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm23225-201ENSMUST00000158121 114 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm24860-201ENSMUST00000158457 276 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm20401-201ENSMUST00000173717 212 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm23450-201ENSMUST00000178285 91 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm8321-201ENSMUST00000181691 980 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm19427-201ENSMUST00000183619 208 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm42539-201ENSMUST00000197009 308 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm8891-201ENSMUST00000198546 832 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Use1Q9CQ56 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Clec2j-201ENSMUST00000032517 515 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm25187-201ENSMUST00000083906 133 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm25821-201ENSMUST00000093657 133 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.46□□□□□ -1.7
Use1Q9CQ56 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Use1Q9CQ56 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Use1Q9CQ56 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm13887-201ENSMUST00000119009 344 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Mup-ps16-201ENSMUST00000120085 596 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm13232-201ENSMUST00000121816 632 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm22819-201ENSMUST00000157445 303 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm16134-201ENSMUST00000161714 336 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm29281-201ENSMUST00000188077 381 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm43144-201ENSMUST00000198256 485 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm19761-201ENSMUST00000205372 391 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm5457-201ENSMUST00000022260 333 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.45□□□□□ -1.7
Use1Q9CQ56 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm12901-201ENSMUST00000118690 532 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm13902-201ENSMUST00000120168 605 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm25966-201ENSMUST00000157169 117 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm3091-201ENSMUST00000163408 484 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm23633-201ENSMUST00000175293 119 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Mir6344-201ENSMUST00000183462 104 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm28859-201ENSMUST00000186650 616 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm28769-201ENSMUST00000190176 615 ntBASIC4.44□□□□□ -1.7
Use1Q9CQ56 Gm4714-201ENSMUST00000203395 279 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms