Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm24444-201ENSMUST00000157244 308 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm26353-201ENSMUST00000158224 255 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm3242-201ENSMUST00000171273 485 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm24103-201ENSMUST00000174930 77 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm27348-201ENSMUST00000184511 170 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm29563-201ENSMUST00000187249 496 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm37828-201ENSMUST00000192496 432 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm2979-201ENSMUST00000193442 463 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm44274-201ENSMUST00000203417 256 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm29920-201ENSMUST00000206876 754 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm45874-201ENSMUST00000212423 346 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm20734-201ENSMUST00000216939 193 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 AC152946.2-201ENSMUST00000219071 337 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm18704-201ENSMUST00000219736 446 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 AC116589.7-201ENSMUST00000221061 239 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 AC164117.1-201ENSMUST00000221726 239 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 AC124569.1-201ENSMUST00000225932 101 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 AC167192.3-201ENSMUST00000224096 1567 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.76□□□□□ -1.33
Trim11Q99PQ2 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Mir297a-2-201ENSMUST00000103795 90 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm12322-201ENSMUST00000121605 389 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm16331-201ENSMUST00000144274 498 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm22428-201ENSMUST00000158554 132 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm19932-201ENSMUST00000177033 313 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm21959-201ENSMUST00000178439 452 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm37966-201ENSMUST00000193122 326 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm37341-201ENSMUST00000194680 371 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm42776-201ENSMUST00000198031 406 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm44382-201ENSMUST00000198683 122 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm7181-201ENSMUST00000202197 434 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 AC154506.1-201ENSMUST00000225178 621 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm24200-201ENSMUST00000082955 157 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm25793-201ENSMUST00000083287 107 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Trim11Q99PQ2 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Trim11Q99PQ2 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.74□□□□□ -1.33
Trim11Q99PQ2 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim11Q99PQ2 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim11Q99PQ2 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.74□□□□□ -1.33
Trim11Q99PQ2 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim11Q99PQ2 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim11Q99PQ2 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms