Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm26486-201ENSMUST00000158021 110 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm24857-201ENSMUST00000158061 310 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm20415-201ENSMUST00000172877 423 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm24157-201ENSMUST00000175265 111 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm27360-201ENSMUST00000183487 80 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm4854-201ENSMUST00000185902 574 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm18403-201ENSMUST00000192907 529 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm38167-201ENSMUST00000195704 1178 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm43689-201ENSMUST00000195951 427 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm43043-201ENSMUST00000196579 412 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm5711-201ENSMUST00000197896 421 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Mir466e-201ENSMUST00000198862 84 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Mir466c-1-201ENSMUST00000200654 84 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm43941-201ENSMUST00000203303 1073 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm21054-201ENSMUST00000203981 380 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 AC159380.1-201ENSMUST00000218096 121 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 AC122924.2-201ENSMUST00000220799 298 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm6887-201ENSMUST00000080945 482 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Snord42a-201ENSMUST00000082606 65 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Gm44164-201ENSMUST00000203605 2561 ntBASIC6.6□□□□□ -1.35
Pcdhb7Q8CDY9 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm11409-201ENSMUST00000118621 403 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm12447-201ENSMUST00000119110 470 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm15149-201ENSMUST00000119370 360 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm7746-201ENSMUST00000120966 503 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm15167-201ENSMUST00000121997 187 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm12833-201ENSMUST00000136112 477 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm25048-201ENSMUST00000158598 91 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm29045-201ENSMUST00000187278 698 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm21735-201ENSMUST00000190360 696 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm37455-201ENSMUST00000191993 529 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm20926-201ENSMUST00000194457 696 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm43355-201ENSMUST00000196541 346 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 AC154521.1-201ENSMUST00000222635 330 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 AC154224.1-201ENSMUST00000224367 403 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Gm24621-201ENSMUST00000082679 140 ntBASIC6.59□□□□□ -1.35
Pcdhb7Q8CDY9 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms