Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm11866-201ENSMUST00000120209 335 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm23441-201ENSMUST00000157268 127 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm26355-201ENSMUST00000158220 105 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm16134-201ENSMUST00000161714 336 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm21241-201ENSMUST00000179551 934 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm27039-201ENSMUST00000182438 962 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm20819-201ENSMUST00000191091 925 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm20871-201ENSMUST00000191322 931 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm46138-201ENSMUST00000215294 426 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm7588-201ENSMUST00000216866 571 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Nsa2-203ENSMUST00000225410 974 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Lrif1Q8CDD9 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.65□□□□□ -1.66
Lrif1Q8CDD9 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Lrif1Q8CDD9 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.65□□□□□ -1.66
Lrif1Q8CDD9 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.65□□□□□ -1.66
Lrif1Q8CDD9 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.65□□□□□ -1.66
Lrif1Q8CDD9 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Lrif1Q8CDD9 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Lrif1Q8CDD9 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.65□□□□□ -1.66
Lrif1Q8CDD9 Gm25419-201ENSMUST00000104215 191 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm14788-201ENSMUST00000119457 375 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm14125-202ENSMUST00000120921 756 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm12978-201ENSMUST00000121250 522 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm23855-201ENSMUST00000158377 135 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm22923-201ENSMUST00000174952 110 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm5777-201ENSMUST00000177265 448 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Mir6416-201ENSMUST00000183664 117 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Mir7056-201ENSMUST00000183776 59 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm27492-201ENSMUST00000185194 187 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm28769-201ENSMUST00000190176 615 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm36638-201ENSMUST00000193295 400 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
Lrif1Q8CDD9 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lrif1Q8CDD9 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.64□□□□□ -1.67
Lrif1Q8CDD9 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.64□□□□□ -1.67
Lrif1Q8CDD9 Gm18719-201ENSMUST00000196696 1413 ntBASIC4.64□□□□□ -1.67
Lrif1Q8CDD9 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lrif1Q8CDD9 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Lrif1Q8CDD9 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms