Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm13928-201ENSMUST00000120326 1732 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Gm6503-201ENSMUST00000210829 2225 ntBASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Vps53Q8CCB4 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Vps53Q8CCB4 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm25313-201ENSMUST00000101817 116 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm24429-201ENSMUST00000104076 132 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm24160-201ENSMUST00000104594 126 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm14985-201ENSMUST00000118693 786 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm13118-201ENSMUST00000120402 549 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm15120-201ENSMUST00000120602 301 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm23354-201ENSMUST00000158426 104 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm24754-201ENSMUST00000177997 107 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm23287-201ENSMUST00000179427 116 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm23143-201ENSMUST00000180137 116 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
Vps53Q8CCB4 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm36966-201ENSMUST00000192217 413 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm9931-201ENSMUST00000193584 1185 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm9173-201ENSMUST00000198054 400 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm44281-201ENSMUST00000203090 166 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm44776-201ENSMUST00000207212 381 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm44688-201ENSMUST00000209083 537 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6□□□□□ -1.45
Vps53Q8CCB4 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Supt4b-201ENSMUST00000214434 351 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm21041-201ENSMUST00000214829 823 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 CT030124.1-201ENSMUST00000217130 235 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 AC211878.2-201ENSMUST00000222486 488 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm4822-201ENSMUST00000077551 479 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm24871-201ENSMUST00000083099 116 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm25005-201ENSMUST00000083812 156 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Rnu5g-201ENSMUST00000093721 116 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm19136-201ENSMUST00000190706 2067 ntBASIC6□□□□□ -1.45
Vps53Q8CCB4 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Vps53Q8CCB4 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm15670-201ENSMUST00000117740 447 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm2003-201ENSMUST00000118537 636 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm1989-201ENSMUST00000126244 636 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm25846-201ENSMUST00000158013 135 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm27044-201ENSMUST00000183033 796 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm8498-201ENSMUST00000188227 974 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm38231-201ENSMUST00000192030 347 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm44234-201ENSMUST00000204246 900 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 AC167192.4-201ENSMUST00000224087 993 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 AC154738.1-201ENSMUST00000227054 368 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 AC133654.1-201ENSMUST00000228411 672 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm24706-201ENSMUST00000082806 137 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Gm23508-201ENSMUST00000083079 72 ntBASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Vps53Q8CCB4 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms