Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gm43682-201ENSMUST00000202150 2090 ntBASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gm14849-201ENSMUST00000122293 2846 ntBASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gm12638-201ENSMUST00000119531 298 ntBASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gm24751-201ENSMUST00000157844 102 ntBASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gm38270-201ENSMUST00000192721 407 ntBASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Col6a6Q8C6K9 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm43469-201ENSMUST00000196084 4634 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm37501-201ENSMUST00000192830 691 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm42640-201ENSMUST00000199792 1195 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm7807-201ENSMUST00000212475 578 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 AC125487.2-201ENSMUST00000219810 1300 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm42996-201ENSMUST00000196116 1636 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm8666-201ENSMUST00000117517 292 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm12252-201ENSMUST00000119517 219 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm24505-201ENSMUST00000157682 126 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm3191-201ENSMUST00000167139 346 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm27940-201ENSMUST00000184449 98 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm29428-201ENSMUST00000190086 409 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a6Q8C6K9 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 AC113031.7-201ENSMUST00000228609 1928 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm27266-201ENSMUST00000184521 123 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm45226-201ENSMUST00000206602 288 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm23709-201ENSMUST00000104364 130 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm24982-201ENSMUST00000104456 132 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm15745-201ENSMUST00000119807 115 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm14564-201ENSMUST00000122159 294 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm43853-201ENSMUST00000197162 301 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm45458-201ENSMUST00000209900 522 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a6Q8C6K9 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Synpr-207ENSMUST00000223583 3362 ntBASIC4.04□□□□□ -1.76
Col6a6Q8C6K9 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms