Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Mir678-201ENSMUST00000102114 84 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm14575-201ENSMUST00000117210 560 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm15364-201ENSMUST00000119618 585 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm14294-201ENSMUST00000119749 751 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm13578-201ENSMUST00000120849 590 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm12890-201ENSMUST00000120885 373 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm15141-201ENSMUST00000121860 729 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm9225-201ENSMUST00000121921 836 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm15840-201ENSMUST00000122099 943 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm14804-201ENSMUST00000122322 508 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm24435-201ENSMUST00000157886 110 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm26211-201ENSMUST00000158578 129 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm16038-201ENSMUST00000159317 193 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Mir5110-201ENSMUST00000175537 87 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm25451-201ENSMUST00000177832 121 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm20923-201ENSMUST00000190009 319 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm37265-201ENSMUST00000191698 885 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm37784-201ENSMUST00000193233 189 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm44523-201ENSMUST00000205616 417 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 AC153924.1-201ENSMUST00000220117 312 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 AC167192.2-201ENSMUST00000224794 198 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm23238-201ENSMUST00000083007 164 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm6990-201ENSMUST00000086830 348 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm43924-201ENSMUST00000204851 1736 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm22370-201ENSMUST00000102422 83 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm15076-201ENSMUST00000117076 474 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm14731-201ENSMUST00000119216 376 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm11976-201ENSMUST00000119236 295 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm22276-201ENSMUST00000122469 129 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm25387-201ENSMUST00000157813 132 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm27512-201ENSMUST00000175328 126 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm17048-201ENSMUST00000179266 847 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm17929-201ENSMUST00000186851 627 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm18342-201ENSMUST00000186987 694 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm2427-201ENSMUST00000189121 881 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm19202-201ENSMUST00000198096 808 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Gm3442-201ENSMUST00000216808 710 ntBASIC6.98□□□□□ -1.29
Trim47Q8C0E3 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC6.98□□□□□ -1.29
Trim47Q8C0E3 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms