Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh19Q80TF3 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh19Q80TF3 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.14□□□□□ -1.43
Pcdh19Q80TF3 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh19Q80TF3 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Pcdh19Q80TF3 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.14□□□□□ -1.43
Pcdh19Q80TF3 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.14□□□□□ -1.43
Pcdh19Q80TF3 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Pcdh19Q80TF3 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 AC120375.2-201ENSMUST00000226532 1853 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm13349-201ENSMUST00000118436 411 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm12803-201ENSMUST00000118907 821 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm13170-201ENSMUST00000119716 643 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm14927-201ENSMUST00000120283 454 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm16100-201ENSMUST00000120489 231 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm24343-201ENSMUST00000158708 111 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Mir7072-201ENSMUST00000184542 60 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm28527-201ENSMUST00000185210 297 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm29509-201ENSMUST00000185716 321 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm8860-201ENSMUST00000193160 445 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm8863-201ENSMUST00000216630 926 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm33312-201ENSMUST00000222443 332 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm8526-201ENSMUST00000079153 475 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm22126-201ENSMUST00000083244 142 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm24454-201ENSMUST00000083349 132 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm7646-201ENSMUST00000198590 1346 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Pcdh19Q80TF3 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm11898-201ENSMUST00000117161 385 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm14897-201ENSMUST00000118213 207 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm15237-201ENSMUST00000122104 469 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm23995-201ENSMUST00000158060 129 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm6631-201ENSMUST00000193699 559 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm44312-201ENSMUST00000203536 469 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Gm44571-201ENSMUST00000208092 533 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.12□□□□□ -1.43
Pcdh19Q80TF3 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms