Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Trim28Q62318 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm42905-201ENSMUST00000196237 1611 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm14837-201ENSMUST00000119688 206 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm23229-201ENSMUST00000157297 105 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gm23162-201ENSMUST00000175081 121 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gm29356-201ENSMUST00000186935 373 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm18183-201ENSMUST00000191024 615 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gm6719-201ENSMUST00000202067 335 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gm44212-201ENSMUST00000205016 897 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.47□□□□□ -1.37
Trim28Q62318 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 AC111046.1-201ENSMUST00000217715 412 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 AC158803.3-201ENSMUST00000220024 211 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 AC154636.3-201ENSMUST00000221489 1214 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 AC167192.1-201ENSMUST00000225908 139 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 AC192088.2-201ENSMUST00000227590 411 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim28Q62318 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Trim28Q62318 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.47□□□□□ -1.37
Trim28Q62318 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Trim28Q62318 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Trim28Q62318 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Trim28Q62318 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.46□□□□□ -1.37
Trim28Q62318 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Trim28Q62318 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.46□□□□□ -1.37
Trim28Q62318 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Trim28Q62318 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Trim28Q62318 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim28Q62318 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Trim28Q62318 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim28Q62318 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm12039-201ENSMUST00000118219 180 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm11433-201ENSMUST00000118318 228 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm12717-201ENSMUST00000118427 983 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm15034-201ENSMUST00000120043 349 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm15905-201ENSMUST00000137042 298 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim28Q62318 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm25037-201ENSMUST00000175418 110 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm18397-201ENSMUST00000176704 587 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim28Q62318 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Trim28Q62318 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim28Q62318 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC6.46□□□□□ -1.38
Trim28Q62318 Gm8458-201ENSMUST00000196658 819 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm22897-202ENSMUST00000197782 127 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm19104-201ENSMUST00000198392 679 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm44282-201ENSMUST00000203199 190 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm44402-201ENSMUST00000203677 238 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm45228-201ENSMUST00000206585 352 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm44648-201ENSMUST00000208267 329 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Trim28Q62318 Gm19137-201ENSMUST00000213790 1164 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim28Q62318 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC6.46□□□□□ -1.38
Trim28Q62318 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm17915-201ENSMUST00000222077 548 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Trim28Q62318 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim28Q62318 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim28Q62318 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Trim28Q62318 Mir412-201ENSMUST00000083636 80 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim28Q62318 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim28Q62318 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim28Q62318 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Trim28Q62318 Gm14445-201ENSMUST00000117051 1484 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.46□□□□□ -1.38
Trim28Q62318 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Trim28Q62318 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms