Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm26075-201ENSMUST00000104062 121 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm15745-201ENSMUST00000119807 115 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm13220-201ENSMUST00000121535 508 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm27976-201ENSMUST00000183635 162 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 AC154738.5-201ENSMUST00000227397 310 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.33□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm15385-201ENSMUST00000118725 667 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm27165-201ENSMUST00000183951 232 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm26005-201ENSMUST00000158802 134 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm17046-201ENSMUST00000168078 850 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm26219-201ENSMUST00000175216 71 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm29576-201ENSMUST00000188020 678 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm28354-201ENSMUST00000190904 678 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm18183-201ENSMUST00000191024 615 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm37614-201ENSMUST00000195645 210 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm43144-201ENSMUST00000198256 485 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm18507-201ENSMUST00000218855 525 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm23464-201ENSMUST00000083145 147 ntBASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc88aQ5SNZ0 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm5757-201ENSMUST00000117494 528 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm23743-201ENSMUST00000157389 274 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm6802-202ENSMUST00000186566 126 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm44261-201ENSMUST00000203337 209 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm25134-201ENSMUST00000082646 160 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm43870-201ENSMUST00000205102 4369 ntBASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc88aQ5SNZ0 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm14784-201ENSMUST00000121604 663 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm23638-201ENSMUST00000175073 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm23158-201ENSMUST00000175076 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm22907-201ENSMUST00000175198 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm22625-201ENSMUST00000175382 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm22875-201ENSMUST00000175449 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm25197-201ENSMUST00000175516 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm27857-201ENSMUST00000176930 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm26268-201ENSMUST00000177685 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm23681-201ENSMUST00000178821 126 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm25821-201ENSMUST00000093657 133 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms