Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm11909-201ENSMUST00000121424 759 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm14784-201ENSMUST00000121604 663 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm26347-201ENSMUST00000157526 131 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm25603-201ENSMUST00000158361 105 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm17152-201ENSMUST00000172430 535 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm22826-201ENSMUST00000083774 165 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm26376-201ENSMUST00000104784 110 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm12062-201ENSMUST00000117533 259 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm26238-201ENSMUST00000175538 117 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm29668-201ENSMUST00000187802 315 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm45236-201ENSMUST00000208632 229 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm19096-201ENSMUST00000209705 766 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm45857-201ENSMUST00000212207 356 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm18442-201ENSMUST00000220925 639 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Olfr881-201ENSMUST00000074611 948 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.93□□□□□ -1.62
Upf3bQ3ULL6 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm22498-201ENSMUST00000104497 86 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm12112-201ENSMUST00000117772 231 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm24689-201ENSMUST00000157760 104 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm24239-201ENSMUST00000157791 255 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.92□□□□□ -1.62
Upf3bQ3ULL6 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Upf3bQ3ULL6 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms