Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm23669-201ENSMUST00000157470 128 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm24236-201ENSMUST00000157794 134 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm25439-201ENSMUST00000158280 131 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm20462-201ENSMUST00000172623 408 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm19203-201ENSMUST00000174049 939 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm24465-201ENSMUST00000178398 107 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Ighv1-41-201ENSMUST00000194414 329 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm42818-201ENSMUST00000198869 987 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm44795-201ENSMUST00000205496 319 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm44673-201ENSMUST00000205692 996 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm19196-201ENSMUST00000209258 357 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm30738-201ENSMUST00000221346 502 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm9628-201ENSMUST00000222169 725 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 CT485612.3-201ENSMUST00000222179 408 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC124729.1-202ENSMUST00000225587 938 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC163295.1-201ENSMUST00000227840 314 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm25005-201ENSMUST00000083812 156 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Usp39Q3TIX9 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm11699-201ENSMUST00000119016 401 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 H3f3c-201ENSMUST00000119459 411 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm12433-201ENSMUST00000119659 255 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm13367-201ENSMUST00000119955 796 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm14383-201ENSMUST00000121637 386 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm14589-201ENSMUST00000121640 727 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm26489-201ENSMUST00000157880 264 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm23505-201ENSMUST00000158989 130 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm9006-201ENSMUST00000165520 841 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm21999-201ENSMUST00000165985 387 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Adgrg4-206ENSMUST00000168724 531 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm17511-201ENSMUST00000172206 342 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm28883-201ENSMUST00000189256 369 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm44050-201ENSMUST00000204263 527 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.35□□□□□ -1.55
Usp39Q3TIX9 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.35□□□□□ -1.55
Usp39Q3TIX9 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms