Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm7375-201ENSMUST00000179232 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm3681-201ENSMUST00000179940 639 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Mir7578-201ENSMUST00000183455 82 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 AC156504.1-201ENSMUST00000214608 157 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 AC153526.1-201ENSMUST00000219750 190 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col17a1Q07563 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col17a1Q07563 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm43469-201ENSMUST00000196084 4634 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC7.63□□□□□ -1.19
Col17a1Q07563 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col17a1Q07563 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Col17a1Q07563 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC7.63□□□□□ -1.19
Col17a1Q07563 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col17a1Q07563 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col17a1Q07563 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col17a1Q07563 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm12757-201ENSMUST00000119465 800 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm11325-201ENSMUST00000119967 469 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm13118-201ENSMUST00000120402 549 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm14383-201ENSMUST00000121637 386 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm6542-201ENSMUST00000153606 772 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm21638-201ENSMUST00000179473 836 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm38270-201ENSMUST00000192721 407 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm17781-201ENSMUST00000195232 649 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm44648-201ENSMUST00000208267 329 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm18940-201ENSMUST00000222518 871 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm4541-201ENSMUST00000208901 1848 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Col17a1Q07563 AC139218.1-201ENSMUST00000228215 4287 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm44439-201ENSMUST00000203379 3592 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm25764-201ENSMUST00000104092 134 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm25833-201ENSMUST00000104137 133 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm15933-201ENSMUST00000117215 616 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm3160-201ENSMUST00000128343 607 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm24739-201ENSMUST00000158855 292 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Mir6917-201ENSMUST00000184111 61 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm37164-201ENSMUST00000192809 637 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Col17a1Q07563 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC7.62□□□□□ -1.19
Col17a1Q07563 CT009733.1-203ENSMUST00000224033 451 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 AC173482.3-201ENSMUST00000225492 1212 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Gm5548-201ENSMUST00000055878 397 ntBASIC7.62□□□□□ -1.19
Col17a1Q07563 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm15624-203ENSMUST00000204811 3402 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Cmah-208ENSMUST00000224819 9482 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col17a1Q07563 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm11896-201ENSMUST00000121105 820 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Trdv3-201ENSMUST00000198551 309 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC7.61□□□□□ -1.19
Col17a1Q07563 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC7.61□□□□□ -1.19
Col17a1Q07563 CR974429.1-201ENSMUST00000220877 827 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms