Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NcanP55066 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NcanP55066 Gm21654-201ENSMUST00000188086 691 ntBASIC5.23□□□□□ -1.57
NcanP55066 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Gm18403-201ENSMUST00000192907 529 ntBASIC5.23□□□□□ -1.57
NcanP55066 Gm38185-201ENSMUST00000193195 694 ntBASIC5.23□□□□□ -1.57
NcanP55066 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC5.23□□□□□ -1.57
NcanP55066 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC5.23□□□□□ -1.57
NcanP55066 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
NcanP55066 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.23□□□□□ -1.57
NcanP55066 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.23□□□□□ -1.57
NcanP55066 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NcanP55066 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
NcanP55066 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NcanP55066 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NcanP55066 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NcanP55066 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.23□□□□□ -1.57
NcanP55066 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.23□□□□□ -1.57
NcanP55066 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.23□□□□□ -1.57
NcanP55066 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.23□□□□□ -1.57
NcanP55066 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NcanP55066 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
NcanP55066 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.23□□□□□ -1.57
NcanP55066 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NcanP55066 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.22□□□□□ -1.57
NcanP55066 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NcanP55066 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.22□□□□□ -1.57
NcanP55066 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
NcanP55066 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NcanP55066 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NcanP55066 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 Gm14687-201ENSMUST00000120206 363 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm14383-201ENSMUST00000121637 386 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.22□□□□□ -1.57
NcanP55066 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.22□□□□□ -1.57
NcanP55066 Mir6917-201ENSMUST00000184111 61 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm29228-201ENSMUST00000185489 418 ntBASIC5.22□□□□□ -1.57
NcanP55066 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 Gm38150-201ENSMUST00000192996 452 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC5.22□□□□□ -1.57
NcanP55066 Gm43232-201ENSMUST00000201346 364 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm8774-201ENSMUST00000203621 692 ntBASIC5.22□□□□□ -1.57
NcanP55066 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm7034-201ENSMUST00000218638 645 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm32526-201ENSMUST00000221878 981 ntBASIC5.22□□□□□ -1.57
NcanP55066 Gm18940-201ENSMUST00000222518 871 ntBASIC5.22□□□□□ -1.57
NcanP55066 AC154441.1-201ENSMUST00000223653 1006 ntBASIC5.22□□□□□ -1.57
NcanP55066 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NcanP55066 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NcanP55066 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NcanP55066 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NcanP55066 Gm37236-201ENSMUST00000193670 3249 ntBASIC5.22□□□□□ -1.57
NcanP55066 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.22□□□□□ -1.57
NcanP55066 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.22□□□□□ -1.57
NcanP55066 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NcanP55066 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.22□□□□□ -1.57
NcanP55066 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NcanP55066 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NcanP55066 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
NcanP55066 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NcanP55066 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
NcanP55066 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.21□□□□□ -1.57
NcanP55066 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
NcanP55066 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NcanP55066 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.21□□□□□ -1.57
NcanP55066 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
NcanP55066 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.21□□□□□ -1.58
NcanP55066 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NcanP55066 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NcanP55066 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NcanP55066 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NcanP55066 Gm11406-201ENSMUST00000117418 484 ntBASIC5.21□□□□□ -1.58
NcanP55066 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NcanP55066 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NcanP55066 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NcanP55066 Gm22804-201ENSMUST00000158052 101 ntBASIC5.21□□□□□ -1.58
NcanP55066 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NcanP55066 Gm22698-201ENSMUST00000175375 108 ntBASIC5.21□□□□□ -1.58
NcanP55066 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.21□□□□□ -1.58
NcanP55066 Gm4479-201ENSMUST00000178807 171 ntBASIC5.21□□□□□ -1.58
NcanP55066 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms