Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Sox3P53784 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox3P53784 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.61□□□□□ -1.67
Sox3P53784 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
Sox3P53784 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Sox3P53784 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Sox3P53784 Gm11970-201ENSMUST00000116105 320 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm16149-201ENSMUST00000117631 309 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm14878-201ENSMUST00000118167 293 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm8129-201ENSMUST00000118230 213 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm11781-201ENSMUST00000118328 472 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm15791-201ENSMUST00000120365 319 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm23069-201ENSMUST00000158240 311 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm25748-201ENSMUST00000175487 70 ntBASIC4.6□□□□□ -1.67
Sox3P53784 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.6□□□□□ -1.67
Sox3P53784 Mir6416-201ENSMUST00000183664 117 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm28859-201ENSMUST00000186650 616 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm2497-201ENSMUST00000189539 601 ntBASIC4.6□□□□□ -1.67
Sox3P53784 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 Gm5285-201ENSMUST00000193089 666 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm43350-201ENSMUST00000196382 711 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm2142-201ENSMUST00000197899 589 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sox3P53784 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.6□□□□□ -1.67
Sox3P53784 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.6□□□□□ -1.67
Sox3P53784 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Sox3P53784 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.6□□□□□ -1.67
Sox3P53784 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.6□□□□□ -1.67
Sox3P53784 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Sox3P53784 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.6□□□□□ -1.67
Sox3P53784 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Sox3P53784 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Sox3P53784 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.6□□□□□ -1.67
Sox3P53784 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Sox3P53784 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Sox3P53784 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sox3P53784 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Sox3P53784 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
Sox3P53784 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Sox3P53784 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sox3P53784 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Sox3P53784 Gm11486-201ENSMUST00000107322 478 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.59□□□□□ -1.67
Sox3P53784 Gm11971-201ENSMUST00000117715 288 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm12039-201ENSMUST00000118219 180 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm6584-201ENSMUST00000119671 447 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm13232-201ENSMUST00000121816 632 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.59□□□□□ -1.67
Sox3P53784 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.59□□□□□ -1.67
Sox3P53784 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Sox3P53784 Gm23673-201ENSMUST00000157474 298 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm25048-201ENSMUST00000158598 91 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm25714-201ENSMUST00000158626 296 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm22501-201ENSMUST00000158981 127 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm18828-202ENSMUST00000181035 310 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sox3P53784 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm28097-201ENSMUST00000187333 366 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm21617-201ENSMUST00000188297 691 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.59□□□□□ -1.67
Sox3P53784 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sox3P53784 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.59□□□□□ -1.67
Sox3P53784 Gm42458-201ENSMUST00000201914 369 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.59□□□□□ -1.67
Sox3P53784 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.59□□□□□ -1.67
Sox3P53784 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.59□□□□□ -1.67
Sox3P53784 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Sox3P53784 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.59□□□□□ -1.67
Sox3P53784 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Sox3P53784 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Sox3P53784 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sox3P53784 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sox3P53784 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Sox3P53784 Mir20a-201ENSMUST00000083508 107 ntBASIC4.59□□□□□ -1.67
Sox3P53784 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
Sox3P53784 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.59□□□□□ -1.68
Sox3P53784 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Sox3P53784 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
Sox3P53784 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Sox3P53784 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Sox3P53784 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms