Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Rfx3P48381 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm12261-201ENSMUST00000117499 645 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Gm3267-201ENSMUST00000118671 473 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Gm12849-201ENSMUST00000120013 739 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Gm11584-201ENSMUST00000120636 325 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm26312-201ENSMUST00000157769 165 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm23799-201ENSMUST00000175559 120 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm27039-201ENSMUST00000182438 962 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Gm27036-201ENSMUST00000182465 980 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Mir7056-201ENSMUST00000183776 59 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm43005-201ENSMUST00000199015 648 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm21112-201ENSMUST00000212224 578 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Gm7760-201ENSMUST00000212265 578 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm7807-201ENSMUST00000212475 578 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm24166-201ENSMUST00000082724 135 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Mir30b-201ENSMUST00000083542 96 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Mir504-201ENSMUST00000093602 79 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.26□□□□□ -1.73
Rfx3P48381 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Rfx3P48381 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Rfx3P48381 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm15779-201ENSMUST00000117470 412 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Gm23534-201ENSMUST00000157539 97 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Gm26310-201ENSMUST00000157766 117 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Rfx3P48381 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm20674-201ENSMUST00000177452 369 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Gm27551-201ENSMUST00000184258 77 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.25□□□□□ -1.73
Rfx3P48381 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.25□□□□□ -1.73
Rfx3P48381 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.25□□□□□ -1.73
Rfx3P48381 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm44779-201ENSMUST00000206937 708 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Gm44690-201ENSMUST00000207984 382 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.25□□□□□ -1.73
Rfx3P48381 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Nsa2-203ENSMUST00000225410 974 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Rfx3P48381 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Rfx3P48381 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Rfx3P48381 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm23623-201ENSMUST00000082461 107 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Rfx3P48381 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Rfx3P48381 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx3P48381 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.25□□□□□ -1.73
Rfx3P48381 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Rfx3P48381 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.25□□□□□ -1.73
Rfx3P48381 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms