Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Traf1P39428 Gm7439-201ENSMUST00000214053 835 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Gm46191-201ENSMUST00000218899 433 ntBASIC5.71□□□□□ -1.5
Traf1P39428 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.71□□□□□ -1.5
Traf1P39428 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Traf1P39428 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Traf1P39428 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.71□□□□□ -1.5
Traf1P39428 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Traf1P39428 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Traf1P39428 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Traf1P39428 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Traf1P39428 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Traf1P39428 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.71□□□□□ -1.5
Traf1P39428 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Traf1P39428 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Traf1P39428 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Traf1P39428 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Traf1P39428 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.7□□□□□ -1.5
Traf1P39428 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.7□□□□□ -1.5
Traf1P39428 Gm12261-201ENSMUST00000117499 645 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm25103-201ENSMUST00000122671 318 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm15905-201ENSMUST00000137042 298 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm22158-201ENSMUST00000158411 126 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.7□□□□□ -1.5
Traf1P39428 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Gm29011-201ENSMUST00000191059 712 ntBASIC5.7□□□□□ -1.5
Traf1P39428 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Gm37934-201ENSMUST00000192902 402 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm37614-201ENSMUST00000195645 210 ntBASIC5.7□□□□□ -1.5
Traf1P39428 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Gm44403-201ENSMUST00000198554 129 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm34224-201ENSMUST00000204606 364 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.7□□□□□ -1.5
Traf1P39428 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Traf1P39428 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.7□□□□□ -1.5
Traf1P39428 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.7□□□□□ -1.5
Traf1P39428 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.7□□□□□ -1.5
Traf1P39428 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.7□□□□□ -1.5
Traf1P39428 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.7□□□□□ -1.5
Traf1P39428 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Traf1P39428 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Traf1P39428 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Traf1P39428 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Traf1P39428 Gm26376-201ENSMUST00000104784 110 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.69□□□□□ -1.5
Traf1P39428 Gm11313-201ENSMUST00000118779 432 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Gm15480-201ENSMUST00000120442 519 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Gm11910-201ENSMUST00000121624 432 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Traf1P39428 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.69□□□□□ -1.5
Traf1P39428 Gm23673-201ENSMUST00000157474 298 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 Gm29036-201ENSMUST00000189967 877 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Gm10292-202ENSMUST00000193165 585 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Gm36997-201ENSMUST00000195090 707 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.69□□□□□ -1.5
Traf1P39428 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.69□□□□□ -1.5
Traf1P39428 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Gm44845-201ENSMUST00000208773 335 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.69□□□□□ -1.5
Traf1P39428 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.69□□□□□ -1.5
Traf1P39428 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Traf1P39428 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC5.69□□□□□ -1.5
Traf1P39428 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.69□□□□□ -1.5
Traf1P39428 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.69□□□□□ -1.5
Traf1P39428 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Traf1P39428 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms