Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm11874-201ENSMUST00000117437 130 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Gm13567-201ENSMUST00000118026 247 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Gm14603-201ENSMUST00000121275 448 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Gm11931-201ENSMUST00000121630 447 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col1a1P11087 Gm9294-201ENSMUST00000165198 789 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Mir6537-201ENSMUST00000184150 110 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Mir7047-201ENSMUST00000184595 64 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.34□□□□□ -1.55
Col1a1P11087 Gm8498-201ENSMUST00000188227 974 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Gm38201-201ENSMUST00000192143 387 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Mir129b-201ENSMUST00000197461 65 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Gm43405-201ENSMUST00000198642 337 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Gm43559-201ENSMUST00000198755 466 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC5.34□□□□□ -1.55
Col1a1P11087 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col1a1P11087 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.34□□□□□ -1.55
Col1a1P11087 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col1a1P11087 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col1a1P11087 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col1a1P11087 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Col1a1P11087 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Col1a1P11087 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col1a1P11087 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.34□□□□□ -1.56
Col1a1P11087 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col1a1P11087 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col1a1P11087 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col1a1P11087 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col1a1P11087 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col1a1P11087 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col1a1P11087 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm2182-201ENSMUST00000145243 663 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm27896-201ENSMUST00000175162 317 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 Gm25748-201ENSMUST00000175487 70 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm28389-201ENSMUST00000190090 697 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col1a1P11087 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 Gm6177-201ENSMUST00000085589 465 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col1a1P11087 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col1a1P11087 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.33□□□□□ -1.56
Col1a1P11087 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Col1a1P11087 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col1a1P11087 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col1a1P11087 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.33□□□□□ -1.56
Col1a1P11087 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Col1a1P11087 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Col1a1P11087 Gm15076-201ENSMUST00000117076 474 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Gm8051-201ENSMUST00000120464 466 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.32□□□□□ -1.56
Col1a1P11087 Mir7658-201ENSMUST00000184043 57 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Gm27695-201ENSMUST00000184301 91 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Gm37495-201ENSMUST00000194590 264 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Gm42579-201ENSMUST00000200512 734 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col1a1P11087 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.32□□□□□ -1.56
Col1a1P11087 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Col1a1P11087 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Col1a1P11087 AC124408.1-201ENSMUST00000228938 707 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col1a1P11087 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col1a1P11087 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col1a1P11087 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col1a1P11087 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col1a1P11087 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col1a1P11087 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col1a1P11087 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Col1a1P11087 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col1a1P11087 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Col1a1P11087 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col1a1P11087 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Col1a1P11087 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Gm15263-201ENSMUST00000121556 642 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col1a1P11087 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Col1a1P11087 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.32□□□□□ -1.56
Col1a1P11087 Gm18877-201ENSMUST00000207706 539 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Gm18320-201ENSMUST00000211304 595 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.32□□□□□ -1.56
Col1a1P11087 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.32□□□□□ -1.56
Col1a1P11087 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Col1a1P11087 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.31□□□□□ -1.56
Col1a1P11087 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.31□□□□□ -1.56
Col1a1P11087 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col1a1P11087 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms