Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgb3O54879 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm14871-201ENSMUST00000119056 194 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Hmgb3O54879 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm29475-201ENSMUST00000190767 312 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm37881-201ENSMUST00000193001 421 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm20056-201ENSMUST00000194813 519 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm8069-201ENSMUST00000197887 154 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm43144-201ENSMUST00000198256 485 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm8891-201ENSMUST00000198546 832 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm9038-201ENSMUST00000203400 604 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC3.7□□□□□ -1.82
Hmgb3O54879 AC122332.1-201ENSMUST00000214384 285 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm9269-201ENSMUST00000221661 578 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 AC211878.5-201ENSMUST00000221697 409 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 AC162183.1-202ENSMUST00000225434 904 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgb3O54879 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgb3O54879 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm29293-201ENSMUST00000189416 2188 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hmgb3O54879 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgb3O54879 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm37268-201ENSMUST00000192254 2614 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgb3O54879 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hmgb3O54879 Gm38235-201ENSMUST00000194600 4952 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC3.7□□□□□ -1.82
Hmgb3O54879 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm38032-201ENSMUST00000195052 1589 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm23750-201ENSMUST00000104222 132 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm9429-201ENSMUST00000117804 868 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm5133-201ENSMUST00000118940 1255 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 H3f3c-201ENSMUST00000119459 411 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm25363-201ENSMUST00000158850 245 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm27492-201ENSMUST00000185194 187 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm28263-201ENSMUST00000185884 400 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm36964-201ENSMUST00000191876 198 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Igkv3-8-201ENSMUST00000197635 339 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 n-TStga1-201ENSMUST00000199903 109 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm29793-201ENSMUST00000202874 460 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm44091-201ENSMUST00000205212 649 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm44776-201ENSMUST00000207212 381 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hmgb3O54879 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC3.69□□□□□ -1.82
Hmgb3O54879 AC127242.4-201ENSMUST00000221242 470 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 AC153153.2-201ENSMUST00000223572 411 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 AL671874.1-201ENSMUST00000223746 1123 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm23623-201ENSMUST00000082461 107 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm23300-201ENSMUST00000082712 125 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm23459-201ENSMUST00000083259 131 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Mir202-201ENSMUST00000083568 72 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Hmgb3O54879 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hmgb3O54879 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Hmgb3O54879 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.69□□□□□ -1.82
Hmgb3O54879 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms