Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm14898-201ENSMUST00000120202 645 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm22794-201ENSMUST00000157228 306 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm22724-201ENSMUST00000158091 127 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm23224-201ENSMUST00000158122 271 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm23205-201ENSMUST00000158671 103 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm24957-201ENSMUST00000179604 132 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm27754-201ENSMUST00000183340 126 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm27659-201ENSMUST00000183472 98 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm18727-201ENSMUST00000185981 553 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm37609-201ENSMUST00000191778 678 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm18426-201ENSMUST00000191874 973 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm38281-201ENSMUST00000192301 315 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm2040-201ENSMUST00000202979 289 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm44281-201ENSMUST00000203090 166 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm8999-201ENSMUST00000204951 969 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm45034-201ENSMUST00000206831 482 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm45750-201ENSMUST00000211966 354 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Cma2-202ENSMUST00000228263 857 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm25004-201ENSMUST00000083811 161 ntBASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
H2afb3S4R1G7 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm2223-201ENSMUST00000112099 1350 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm42701-201ENSMUST00000196117 1657 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm24886-201ENSMUST00000104384 123 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm26144-201ENSMUST00000104475 132 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm5073-201ENSMUST00000118222 820 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm5943-201ENSMUST00000119458 459 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm12825-201ENSMUST00000120249 563 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm15044-201ENSMUST00000120703 598 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm14876-201ENSMUST00000120795 327 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm26393-201ENSMUST00000157625 129 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm15812-201ENSMUST00000162331 748 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm27030-201ENSMUST00000182551 464 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm8669-201ENSMUST00000183839 945 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm27942-201ENSMUST00000184669 101 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm28956-201ENSMUST00000189047 427 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm37433-201ENSMUST00000192695 678 ntBASIC4.8□□□□□ -1.64
H2afb3S4R1G7 Gm37088-201ENSMUST00000193887 406 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms