Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.53□□□□□ -1.68
Upk3aQ9JKX8 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.53□□□□□ -1.69
Upk3aQ9JKX8 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.53□□□□□ -1.69
Upk3aQ9JKX8 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
Upk3aQ9JKX8 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.53□□□□□ -1.69
Upk3aQ9JKX8 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm23746-201ENSMUST00000104229 125 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm23709-201ENSMUST00000104364 130 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm16128-201ENSMUST00000117855 626 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm12287-201ENSMUST00000119770 707 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm15057-201ENSMUST00000121516 534 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm15905-201ENSMUST00000137042 298 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm5353-201ENSMUST00000139800 793 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm22601-201ENSMUST00000157595 250 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm22857-201ENSMUST00000174969 134 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm29138-201ENSMUST00000191444 348 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm36998-201ENSMUST00000193205 704 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm19596-201ENSMUST00000203685 739 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm44138-201ENSMUST00000204939 271 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm44779-201ENSMUST00000206937 708 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Gm18258-201ENSMUST00000210413 542 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Upk3aQ9JKX8 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm26376-201ENSMUST00000104784 110 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm14725-201ENSMUST00000120324 828 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm14784-201ENSMUST00000121604 663 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm24251-201ENSMUST00000157324 114 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm26347-201ENSMUST00000157526 131 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm23513-201ENSMUST00000158181 133 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Mir7022-201ENSMUST00000183749 61 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm8069-201ENSMUST00000197887 154 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm6719-201ENSMUST00000202067 335 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.51□□□□□ -1.69
Upk3aQ9JKX8 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms