Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Gm44708-201ENSMUST00000205580 2237 ntBASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim39Q9ESN2 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm22256-201ENSMUST00000102291 107 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm13469-201ENSMUST00000118231 350 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm14292-201ENSMUST00000118761 456 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm15333-201ENSMUST00000118825 364 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm14613-201ENSMUST00000122239 752 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm25706-201ENSMUST00000157828 247 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm22523-201ENSMUST00000158696 100 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Zfp-ps-201ENSMUST00000185025 478 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm28629-201ENSMUST00000187309 263 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm35323-201ENSMUST00000191836 499 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Trbv12-3-201ENSMUST00000192675 372 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm33973-201ENSMUST00000195148 534 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm5322-201ENSMUST00000206142 699 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm45523-201ENSMUST00000210712 799 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm18703-201ENSMUST00000215318 333 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm46311-201ENSMUST00000217971 203 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 AC139350.4-201ENSMUST00000228483 798 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm24037-201ENSMUST00000082871 180 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm24405-201ENSMUST00000083033 167 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm38375-201ENSMUST00000194610 2227 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.04□□□□□ -1.44
Trim39Q9ESN2 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm43924-201ENSMUST00000204851 1736 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 AC164297.6-201ENSMUST00000224643 1568 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm24869-201ENSMUST00000104072 128 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm11462-201ENSMUST00000117749 562 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm8534-201ENSMUST00000118553 766 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm7429-201ENSMUST00000118664 348 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm14046-201ENSMUST00000119389 509 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm13804-201ENSMUST00000119552 172 ntBASIC6.03□□□□□ -1.44
Trim39Q9ESN2 Gm13735-201ENSMUST00000120217 670 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms