Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm8891-201ENSMUST00000198546 832 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Gm45733-201ENSMUST00000212988 437 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Mir31-201ENSMUST00000083474 106 ntBASIC4.56□□□□□ -1.68
Lima1Q9ERG0 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lima1Q9ERG0 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm12311-201ENSMUST00000118803 374 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm11877-201ENSMUST00000118921 852 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm14695-201ENSMUST00000121721 282 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm16254-201ENSMUST00000131528 730 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm23673-201ENSMUST00000157474 298 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm24561-201ENSMUST00000175182 95 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm27551-201ENSMUST00000184258 77 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Mir6418-201ENSMUST00000185075 115 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm28116-201ENSMUST00000189064 387 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm37631-201ENSMUST00000192275 364 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm18325-201ENSMUST00000203228 835 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm45789-201ENSMUST00000213038 364 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.55□□□□□ -1.68
Lima1Q9ERG0 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm13250-201ENSMUST00000117209 753 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm12849-201ENSMUST00000120013 739 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm11448-201ENSMUST00000120427 450 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm5391-201ENSMUST00000121155 613 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm6647-201ENSMUST00000170514 641 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm2142-201ENSMUST00000197899 589 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm3816-201ENSMUST00000209803 433 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lima1Q9ERG0 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms