Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm15233-201ENSMUST00000118747 400 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm13555-201ENSMUST00000121668 319 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm24343-201ENSMUST00000158708 111 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm8161-201ENSMUST00000168739 481 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm27037-201ENSMUST00000182270 960 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm28974-201ENSMUST00000187893 231 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm38097-201ENSMUST00000192936 439 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm37375-201ENSMUST00000193859 387 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm37385-201ENSMUST00000195223 387 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm17893-201ENSMUST00000203017 770 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm20997-201ENSMUST00000205148 231 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm19921-201ENSMUST00000210505 703 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm18996-201ENSMUST00000214851 755 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm19936-201ENSMUST00000216414 838 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm5471-201ENSMUST00000072732 337 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Snora44-201ENSMUST00000082670 129 ntBASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Ddx56Q9D0R4 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm13379-201ENSMUST00000118053 621 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm11212-201ENSMUST00000118337 618 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm11737-201ENSMUST00000118713 468 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm14874-201ENSMUST00000118995 438 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm15754-201ENSMUST00000119191 478 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm15387-201ENSMUST00000120421 648 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm16412-201ENSMUST00000121602 273 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm10177-202ENSMUST00000161698 207 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm3030-201ENSMUST00000163410 516 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm3339-201ENSMUST00000163462 475 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm9294-201ENSMUST00000165198 789 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm2855-201ENSMUST00000166765 456 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm8941-201ENSMUST00000181451 899 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm27024-201ENSMUST00000182561 755 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm27754-201ENSMUST00000183340 126 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm37164-201ENSMUST00000192809 637 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm5842-201ENSMUST00000195073 622 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm42539-201ENSMUST00000197009 308 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm43444-201ENSMUST00000198123 291 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Mir219c-201ENSMUST00000199860 60 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm18327-201ENSMUST00000202426 830 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Gm43456-201ENSMUST00000202519 457 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 AC116589.9-201ENSMUST00000221462 908 ntBASIC5.77□□□□□ -1.49
Ddx56Q9D0R4 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms