Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm22220-201ENSMUST00000082671 149 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Smc1aQ9CU62 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.44□□□□□ -1.54
Smc1aQ9CU62 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm24469-201ENSMUST00000104487 131 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm14086-201ENSMUST00000117152 173 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm14516-201ENSMUST00000120012 252 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm15791-201ENSMUST00000120365 319 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm22277-201ENSMUST00000157204 277 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm3091-201ENSMUST00000163408 484 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm29332-201ENSMUST00000190829 227 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm2623-201ENSMUST00000199229 286 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm4321-201ENSMUST00000200520 442 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm18100-201ENSMUST00000200897 452 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm19039-201ENSMUST00000204363 575 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm44817-201ENSMUST00000205416 453 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Mir338-201ENSMUST00000083666 98 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 AC134860.3-201ENSMUST00000223564 1300 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Smc1aQ9CU62 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm22899-201ENSMUST00000104540 131 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm8145-201ENSMUST00000118220 745 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm22726-201ENSMUST00000158089 179 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Mir1947-201ENSMUST00000158235 85 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Trbv10-201ENSMUST00000168322 289 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm29484-201ENSMUST00000186067 324 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm28923-201ENSMUST00000187755 322 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm10048-201ENSMUST00000194196 372 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.42□□□□□ -1.54
Smc1aQ9CU62 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms