Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.56□□□□□ -1.68
Lsm1Q8VC85 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm13887-201ENSMUST00000119009 344 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm13902-201ENSMUST00000120168 605 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm23673-201ENSMUST00000157474 298 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm24239-201ENSMUST00000157791 255 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm23700-201ENSMUST00000158842 102 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm16107-201ENSMUST00000162523 862 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm9027-201ENSMUST00000165914 661 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm3307-201ENSMUST00000176164 632 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm27468-201ENSMUST00000183577 106 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Mir6343-201ENSMUST00000183584 84 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Mir6921-201ENSMUST00000183719 80 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm44521-201ENSMUST00000206469 217 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm33601-201ENSMUST00000210001 961 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm19256-201ENSMUST00000218550 231 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lsm1Q8VC85 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm14516-201ENSMUST00000120012 252 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm17044-201ENSMUST00000168549 828 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm9457-201ENSMUST00000180176 372 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm29484-201ENSMUST00000186067 324 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm44523-201ENSMUST00000205616 417 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm5418-201ENSMUST00000206932 528 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 AC110381.1-201ENSMUST00000218987 586 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm20368-201ENSMUST00000220716 301 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm6171-201ENSMUST00000220760 645 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lsm1Q8VC85 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Lsm1Q8VC85 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Lsm1Q8VC85 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Lsm1Q8VC85 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Lsm1Q8VC85 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lsm1Q8VC85 Gm15166-201ENSMUST00000120790 385 ntBASIC4.53□□□□□ -1.68
Lsm1Q8VC85 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.53□□□□□ -1.68
Lsm1Q8VC85 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Lsm1Q8VC85 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms