Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 AC125464.1-201ENSMUST00000228013 512 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Ccdc9Q8VC31 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm4596-201ENSMUST00000117197 442 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm14878-201ENSMUST00000118167 293 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm6427-201ENSMUST00000118721 979 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm22724-201ENSMUST00000158091 127 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm24636-201ENSMUST00000158673 288 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm3076-201ENSMUST00000161613 451 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm6808-201ENSMUST00000162341 807 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm17044-201ENSMUST00000168549 828 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm29588-201ENSMUST00000185738 298 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm21742-201ENSMUST00000189352 548 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm43828-201ENSMUST00000196890 639 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm2691-201ENSMUST00000203205 901 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm44604-201ENSMUST00000205475 496 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm7443-201ENSMUST00000206355 378 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm19073-201ENSMUST00000219978 555 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Mir20a-201ENSMUST00000083508 107 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm3563-201ENSMUST00000172963 1628 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm44562-201ENSMUST00000207194 1347 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.95□□□□□ -1.46
Ccdc9Q8VC31 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm14106-201ENSMUST00000119382 438 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm12885-201ENSMUST00000122246 328 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm24692-201ENSMUST00000157761 146 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm25348-201ENSMUST00000158961 111 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm27030-201ENSMUST00000182551 464 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm29281-201ENSMUST00000188077 381 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm36974-201ENSMUST00000194200 1071 ntBASIC5.94□□□□□ -1.46
Ccdc9Q8VC31 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms