Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.16□□□□□ -1.42
Brf1Q8CFK2 Gm29084-201ENSMUST00000185587 1452 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm43613-201ENSMUST00000199409 1613 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm24241-201ENSMUST00000157787 145 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm17655-201ENSMUST00000167969 255 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm37700-201ENSMUST00000192617 965 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm9134-201ENSMUST00000193186 551 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm2147-201ENSMUST00000193588 639 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm44282-201ENSMUST00000203199 190 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm30738-201ENSMUST00000221346 502 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm32300-201ENSMUST00000221735 515 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 AC117656.3-205ENSMUST00000224606 1205 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Mir188-201ENSMUST00000083464 68 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Mir412-201ENSMUST00000083636 80 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Brf1Q8CFK2 Gm10794-201ENSMUST00000099624 207 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.15□□□□□ -1.42
Brf1Q8CFK2 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Gm5715-201ENSMUST00000196854 1465 ntBASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Brf1Q8CFK2 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm23274-201ENSMUST00000104056 130 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm25418-201ENSMUST00000104214 129 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm14711-201ENSMUST00000117056 217 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm13311-201ENSMUST00000117863 379 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm11708-201ENSMUST00000119530 832 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Samd15-201ENSMUST00000169669 1194 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm21756-201ENSMUST00000178380 930 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm21405-201ENSMUST00000179024 930 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm28637-201ENSMUST00000179424 345 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm6717-201ENSMUST00000185549 838 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm21191-201ENSMUST00000186484 930 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm28468-201ENSMUST00000188536 615 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm21489-201ENSMUST00000189668 818 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm28567-201ENSMUST00000190270 693 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm29503-201ENSMUST00000191044 930 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm37578-201ENSMUST00000192256 1177 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm37044-201ENSMUST00000193531 693 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm9442-201ENSMUST00000194242 319 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm38369-201ENSMUST00000195101 693 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm7721-201ENSMUST00000200446 546 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm44820-201ENSMUST00000207420 396 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm19196-201ENSMUST00000209258 357 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm45474-201ENSMUST00000209471 408 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm19709-201ENSMUST00000215403 482 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm19181-201ENSMUST00000218891 940 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 Gm20368-201ENSMUST00000220716 301 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6.14□□□□□ -1.43
Brf1Q8CFK2 AC154335.1-201ENSMUST00000224744 395 ntBASIC6.14□□□□□ -1.43
Brf1Q8CFK2 CT025525.3-201ENSMUST00000228858 366 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms