Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm4207-201ENSMUST00000173144 960 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm19206-201ENSMUST00000186401 827 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm38280-201ENSMUST00000192610 158 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm42919-201ENSMUST00000197753 1284 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm9173-201ENSMUST00000198054 400 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm9332-201ENSMUST00000198431 730 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm42516-201ENSMUST00000198691 767 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm44656-201ENSMUST00000208428 490 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm19269-201ENSMUST00000211401 804 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 AC153968.2-201ENSMUST00000215579 1140 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm18705-201ENSMUST00000215985 913 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm17915-201ENSMUST00000222077 548 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Snora44-201ENSMUST00000082670 129 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm15426-201ENSMUST00000117823 556 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12074-201ENSMUST00000120189 219 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Mir1900-201ENSMUST00000122714 78 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm7609-204ENSMUST00000161424 461 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm5777-201ENSMUST00000177265 448 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm6074-201ENSMUST00000193340 451 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm44387-201ENSMUST00000196298 145 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm33952-201ENSMUST00000197795 408 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm44137-201ENSMUST00000203670 367 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm17811-201ENSMUST00000206193 387 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm44585-201ENSMUST00000207150 607 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm45701-201ENSMUST00000212049 235 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 AC166358.3-201ENSMUST00000221456 181 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm19540-201ENSMUST00000221843 810 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 AV026068-224ENSMUST00000224827 928 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms