Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm22530-201ENSMUST00000158820 118 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Fth-ps2-201ENSMUST00000168364 516 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Mir7072-201ENSMUST00000184542 60 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm46996-201ENSMUST00000220924 408 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 AC105407.1-201ENSMUST00000225684 614 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 AC131745.2-201ENSMUST00000225736 565 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim47Q8C0E3 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm20276-201ENSMUST00000216122 2648 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm21051-201ENSMUST00000221757 1688 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7□□□□□ -1.29
Trim47Q8C0E3 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm44164-201ENSMUST00000203605 2561 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm11902-201ENSMUST00000118849 270 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm13013-201ENSMUST00000119087 523 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm4853-201ENSMUST00000119359 394 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm4789-201ENSMUST00000121708 1216 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm11759-201ENSMUST00000121742 464 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm5809-201ENSMUST00000121854 529 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm25325-201ENSMUST00000122559 86 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm22839-201ENSMUST00000158436 304 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Trbv10-201ENSMUST00000168322 289 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm17223-201ENSMUST00000171413 481 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm43355-201ENSMUST00000196541 346 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm44403-201ENSMUST00000198554 129 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm44091-201ENSMUST00000205212 649 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm45150-201ENSMUST00000206051 467 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 AL669916.3-201ENSMUST00000213855 94 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 AL669916.6-201ENSMUST00000214610 94 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 AL669916.4-201ENSMUST00000215976 94 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 AL669916.1-201ENSMUST00000217640 94 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm32526-201ENSMUST00000221878 981 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm18247-201ENSMUST00000222937 601 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Trim47Q8C0E3 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm43326-201ENSMUST00000198459 1638 ntBASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7□□□□□ -1.29
Trim47Q8C0E3 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Trim47Q8C0E3 AC159006.2-201ENSMUST00000228734 4144 ntBASIC6.99□□□□□ -1.29
Trim47Q8C0E3 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trim47Q8C0E3 Gm18180-201ENSMUST00000187562 1484 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms