Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm24371-201ENSMUST00000122662 267 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm25806-201ENSMUST00000122782 122 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm25293-201ENSMUST00000122792 285 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm26169-201ENSMUST00000158420 135 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm18828-202ENSMUST00000181035 310 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm6137-201ENSMUST00000187552 578 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm18426-201ENSMUST00000191874 973 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm9442-201ENSMUST00000194242 319 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm45689-201ENSMUST00000210522 133 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Clec2j-201ENSMUST00000032517 515 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm4963-201ENSMUST00000072718 378 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm24525-201ENSMUST00000082917 151 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Ccdc40Q8BI79 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm25418-201ENSMUST00000104214 129 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Mir466j-201ENSMUST00000116876 122 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm14621-201ENSMUST00000117709 689 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm11409-201ENSMUST00000118621 403 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm15357-201ENSMUST00000119160 285 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm12820-201ENSMUST00000119233 342 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm15390-201ENSMUST00000120323 738 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm11385-201ENSMUST00000121513 570 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm23171-201ENSMUST00000157159 264 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm26490-201ENSMUST00000157879 140 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm24944-201ENSMUST00000158330 128 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm25037-201ENSMUST00000175418 110 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm2497-201ENSMUST00000189539 601 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Mrgpra14-201ENSMUST00000189782 913 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm37293-201ENSMUST00000191658 295 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm44234-201ENSMUST00000204246 900 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm5045-201ENSMUST00000027054 810 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm22741-201ENSMUST00000083438 165 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms