Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scaf4Q6PFF0 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm11561-201ENSMUST00000117429 417 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm8722-201ENSMUST00000121466 769 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm23149-201ENSMUST00000158837 230 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm26557-201ENSMUST00000180756 493 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Mir6411-201ENSMUST00000183556 108 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm37996-201ENSMUST00000191859 367 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm42924-201ENSMUST00000197261 185 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm44316-201ENSMUST00000199274 97 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm44048-201ENSMUST00000204531 361 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm44134-202ENSMUST00000204777 545 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm25133-201ENSMUST00000082647 130 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Snora30-201ENSMUST00000083325 130 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm23452-201ENSMUST00000083327 107 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Mir181a-1-201ENSMUST00000083631 87 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scaf4Q6PFF0 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 AW046200-203ENSMUST00000211787 2479 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm14769-201ENSMUST00000118590 432 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm13785-201ENSMUST00000119099 690 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm14580-201ENSMUST00000119122 718 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm14620-201ENSMUST00000120656 383 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm11369-201ENSMUST00000120812 318 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm13531-201ENSMUST00000121893 543 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm13363-201ENSMUST00000122008 522 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm22480-201ENSMUST00000122568 128 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm23824-201ENSMUST00000158741 276 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm4832-201ENSMUST00000182679 399 ntBASIC5.72□□□□□ -1.49
Scaf4Q6PFF0 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms