Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm7040-201ENSMUST00000223271 443 ntBASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Gm23514-201ENSMUST00000082827 130 ntBASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.59□□□□□ -1.51
Usp49Q6P9L4 Gm42658-201ENSMUST00000197199 1575 ntBASIC5.59□□□□□ -1.52
Usp49Q6P9L4 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Usp49Q6P9L4 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm37965-201ENSMUST00000195304 1362 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm22272-201ENSMUST00000104039 134 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm23274-201ENSMUST00000104056 130 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 H3f3c-201ENSMUST00000119459 411 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm16471-201ENSMUST00000121940 618 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm22818-201ENSMUST00000157446 104 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm22817-201ENSMUST00000157448 356 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm5777-201ENSMUST00000177265 448 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm37659-201ENSMUST00000194574 111 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm37989-201ENSMUST00000195202 803 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm38154-201ENSMUST00000195444 340 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm22897-202ENSMUST00000197782 127 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm18011-201ENSMUST00000203717 565 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm44623-201ENSMUST00000207934 434 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 AC116589.9-201ENSMUST00000221462 908 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm9512-201ENSMUST00000223112 497 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 AC133654.1-201ENSMUST00000228411 672 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm5215-201ENSMUST00000054380 405 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp49Q6P9L4 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm15019-201ENSMUST00000120148 434 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm15390-201ENSMUST00000120323 738 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm15480-201ENSMUST00000120442 519 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm11909-201ENSMUST00000121424 759 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm25714-201ENSMUST00000158626 296 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm23700-201ENSMUST00000158842 102 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm6245-201ENSMUST00000164699 768 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm22392-201ENSMUST00000177971 107 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm27033-201ENSMUST00000183226 544 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm28688-201ENSMUST00000187301 268 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm2053-201ENSMUST00000195671 631 ntBASIC5.57□□□□□ -1.52
Usp49Q6P9L4 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp49Q6P9L4 Gm43408-201ENSMUST00000198263 440 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms