Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm27512-201ENSMUST00000175328 126 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm27193-201ENSMUST00000184217 586 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Mir6362-201ENSMUST00000184329 107 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm28116-201ENSMUST00000189064 387 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm8930-201ENSMUST00000201693 768 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm45474-201ENSMUST00000209471 408 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 AC152946.2-201ENSMUST00000219071 337 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf1Q69ZI1 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm13650-201ENSMUST00000117729 433 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm16216-201ENSMUST00000118970 1111 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm13245-201ENSMUST00000119646 260 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm7700-201ENSMUST00000120273 970 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm25970-201ENSMUST00000157165 86 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm18604-201ENSMUST00000172535 558 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29556-201ENSMUST00000187591 696 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm37341-201ENSMUST00000194680 371 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm43510-201ENSMUST00000197922 353 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm43501-201ENSMUST00000202513 107 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm45171-201ENSMUST00000206360 736 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm17991-201ENSMUST00000208139 297 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44857-201ENSMUST00000208331 196 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm3690-201ENSMUST00000211341 262 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr512-201ENSMUST00000074730 1056 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm8526-201ENSMUST00000079153 475 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm23846-201ENSMUST00000083835 107 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.13□□□□□ -1.43
Sh3rf1Q69ZI1 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms