Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm24251-201ENSMUST00000157324 114 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm22601-201ENSMUST00000157595 250 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm24507-201ENSMUST00000157683 134 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Mir3062-201ENSMUST00000174986 105 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Mir7056-201ENSMUST00000183776 59 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm28503-201ENSMUST00000185966 147 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm37636-201ENSMUST00000193583 359 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm18150-201ENSMUST00000195341 645 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm5284-201ENSMUST00000199053 903 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Mir134-201ENSMUST00000083492 71 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Upf3bQ3ULL6 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm22383-201ENSMUST00000158188 327 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm21241-201ENSMUST00000179551 934 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm20819-201ENSMUST00000191091 925 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm20871-201ENSMUST00000191322 931 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm29138-201ENSMUST00000191444 348 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm44474-201ENSMUST00000196525 127 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm43828-201ENSMUST00000196890 639 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm8069-201ENSMUST00000197887 154 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm29793-201ENSMUST00000202874 460 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm44138-201ENSMUST00000204939 271 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm45007-201ENSMUST00000206237 366 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm45789-201ENSMUST00000213038 364 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Upf3bQ3ULL6 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.94□□□□□ -1.62
Upf3bQ3ULL6 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms