Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm22778-201ENSMUST00000104090 128 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm12854-201ENSMUST00000128518 297 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm27762-201ENSMUST00000183417 109 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm19206-201ENSMUST00000186401 827 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm18342-201ENSMUST00000186987 694 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm2427-201ENSMUST00000189121 881 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm37636-201ENSMUST00000193583 359 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm42824-201ENSMUST00000199361 247 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm34224-201ENSMUST00000204606 364 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm7588-201ENSMUST00000216866 571 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 AC123658.1-201ENSMUST00000228364 867 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm7665-201ENSMUST00000076710 297 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Snora52-201ENSMUST00000082732 137 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.68□□□□□ -1.66
Trafd1Q3UDK1 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm25096-201ENSMUST00000104043 129 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm11822-201ENSMUST00000119177 415 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm22819-201ENSMUST00000157445 303 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm23082-201ENSMUST00000157852 133 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm6647-201ENSMUST00000170514 641 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm9687-201ENSMUST00000189312 602 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm29011-201ENSMUST00000191059 712 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm43717-201ENSMUST00000198684 310 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm5284-201ENSMUST00000199053 903 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm43136-201ENSMUST00000200403 636 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm44952-201ENSMUST00000204443 433 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm4290-201ENSMUST00000206897 814 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm5373-201ENSMUST00000212113 1050 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm7439-201ENSMUST00000214053 835 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.67□□□□□ -1.66
Trafd1Q3UDK1 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trafd1Q3UDK1 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms