Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox9Q04887 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.9□□□□□ -1.46
Sox9Q04887 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox9Q04887 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox9Q04887 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.9□□□□□ -1.47
Sox9Q04887 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox9Q04887 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.9□□□□□ -1.47
Sox9Q04887 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.9□□□□□ -1.47
Sox9Q04887 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
Sox9Q04887 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Sox9Q04887 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.9□□□□□ -1.47
Sox9Q04887 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sox9Q04887 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.9□□□□□ -1.47
Sox9Q04887 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.9□□□□□ -1.47
Sox9Q04887 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.9□□□□□ -1.47
Sox9Q04887 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.9□□□□□ -1.47
Sox9Q04887 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Sox9Q04887 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Sox9Q04887 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Sox9Q04887 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Sox9Q04887 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Sox9Q04887 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Sox9Q04887 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Sox9Q04887 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.9□□□□□ -1.47
Sox9Q04887 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Sox9Q04887 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Mir711-201ENSMUST00000102188 82 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm24125-201ENSMUST00000104105 137 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm22657-201ENSMUST00000104197 132 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC5.89□□□□□ -1.47
Sox9Q04887 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm25430-201ENSMUST00000157614 289 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm23069-201ENSMUST00000158240 311 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm23505-201ENSMUST00000158989 130 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Sox9Q04887 Mir6400-201ENSMUST00000184870 92 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm5372-201ENSMUST00000187540 409 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Sox9Q04887 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm20786-201ENSMUST00000212649 436 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 AL603630.1-201ENSMUST00000214781 147 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Gm18704-201ENSMUST00000219736 446 ntBASIC5.89□□□□□ -1.47
Sox9Q04887 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
Sox9Q04887 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Sox9Q04887 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Sox9Q04887 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Sox9Q04887 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.89□□□□□ -1.47
Sox9Q04887 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.89□□□□□ -1.47
Sox9Q04887 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm13469-201ENSMUST00000118231 350 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm11975-201ENSMUST00000118772 481 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm11719-201ENSMUST00000119399 351 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm4234-201ENSMUST00000119747 714 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm11484-201ENSMUST00000119808 338 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm15038-201ENSMUST00000122144 296 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 n-R5s24-201ENSMUST00000122518 117 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Sox9Q04887 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm26194-201ENSMUST00000175036 71 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm18588-201ENSMUST00000177308 492 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Sox9Q04887 Gm28683-201ENSMUST00000187134 615 ntBASIC5.88□□□□□ -1.47
Sox9Q04887 Gm29650-201ENSMUST00000188485 742 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms