Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm20428-201ENSMUST00000174365 283 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Rab26os-201ENSMUST00000176215 477 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm19206-201ENSMUST00000186401 827 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm38221-201ENSMUST00000195146 365 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm43036-201ENSMUST00000200594 373 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm42458-201ENSMUST00000201914 369 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm33626-201ENSMUST00000206790 828 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.11□□□□□ -1.75
Nkx3-1P97436 AC165092.2-201ENSMUST00000224681 368 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 AC163631.1-201ENSMUST00000225041 598 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Mecom-201ENSMUST00000061088 348 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.11□□□□□ -1.75
Nkx3-1P97436 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm22473-201ENSMUST00000104114 132 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm14172-201ENSMUST00000118255 644 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm16106-201ENSMUST00000119187 294 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm24371-201ENSMUST00000122662 267 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm25427-201ENSMUST00000157605 103 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm23501-201ENSMUST00000157744 256 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm3077-201ENSMUST00000165903 627 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm3084-201ENSMUST00000169967 598 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Mir6975-201ENSMUST00000184879 61 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Mir6933-201ENSMUST00000184982 81 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm19086-201ENSMUST00000190772 665 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nkx3-1P97436 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.1□□□□□ -1.75
Nkx3-1P97436 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nkx3-1P97436 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Nkx3-1P97436 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nkx3-1P97436 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Nkx3-1P97436 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nkx3-1P97436 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm25726-201ENSMUST00000104529 129 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm11914-201ENSMUST00000117094 507 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm13321-201ENSMUST00000117101 400 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm12704-201ENSMUST00000119789 464 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm23465-201ENSMUST00000157134 262 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm18350-201ENSMUST00000187395 955 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm37088-201ENSMUST00000193887 406 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm42990-201ENSMUST00000199231 312 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.09□□□□□ -1.75
Nkx3-1P97436 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.09□□□□□ -1.75
Nkx3-1P97436 Neat1-201ENSMUST00000173672 20771 ntBASIC4.09□□□□□ -1.76
Nkx3-1P97436 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms