Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PrkdcP97313 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PrkdcP97313 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PrkdcP97313 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PrkdcP97313 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
PrkdcP97313 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PrkdcP97313 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PrkdcP97313 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 Gm8993-201ENSMUST00000182182 983 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.08□□□□□ -1.92
PrkdcP97313 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PrkdcP97313 CT030184.2-201ENSMUST00000223064 263 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PrkdcP97313 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PrkdcP97313 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PrkdcP97313 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PrkdcP97313 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 Gm37833-201ENSMUST00000194342 3256 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PrkdcP97313 AC122317.3-201ENSMUST00000219320 3524 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
PrkdcP97313 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.08□□□□□ -1.92
PrkdcP97313 Gm12654-201ENSMUST00000120387 587 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 Gm24363-201ENSMUST00000158440 311 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.08□□□□□ -1.92
PrkdcP97313 Gm9722-201ENSMUST00000194568 802 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.08□□□□□ -1.92
PrkdcP97313 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC3.08□□□□□ -1.92
PrkdcP97313 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PrkdcP97313 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm6558-201ENSMUST00000191934 1973 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm8200-201ENSMUST00000122390 222 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm10087-201ENSMUST00000167650 330 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Mir7050-201ENSMUST00000184636 60 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm29747-201ENSMUST00000194764 585 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Gm45344-201ENSMUST00000211610 341 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 AC125484.1-201ENSMUST00000223218 234 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Gm37488-201ENSMUST00000195434 3374 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Xpo7-203ENSMUST00000226448 3663 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Gm25272-201ENSMUST00000104293 128 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Gm13195-201ENSMUST00000117229 261 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 AC161456.1-201ENSMUST00000206771 887 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PrkdcP97313 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Gm27036-201ENSMUST00000182465 980 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Gm37501-201ENSMUST00000192830 691 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Gm44320-201ENSMUST00000199276 86 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.07□□□□□ -1.92
PrkdcP97313 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PrkdcP97313 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PrkdcP97313 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PrkdcP97313 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
PrkdcP97313 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PrkdcP97313 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms