Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
NcanP55066 Gm24235-201ENSMUST00000104319 129 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm24376-201ENSMUST00000104399 127 ntBASIC5.25□□□□□ -1.57
NcanP55066 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.25□□□□□ -1.57
NcanP55066 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm12379-201ENSMUST00000119607 391 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm15364-201ENSMUST00000119618 585 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.25□□□□□ -1.57
NcanP55066 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.25□□□□□ -1.57
NcanP55066 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Mir5128-201ENSMUST00000175217 84 ntBASIC5.25□□□□□ -1.57
NcanP55066 Mir6344-201ENSMUST00000183462 104 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.25□□□□□ -1.57
NcanP55066 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Gm44463-201ENSMUST00000198895 137 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm43968-201ENSMUST00000203388 389 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.25□□□□□ -1.57
NcanP55066 Gm44648-201ENSMUST00000208267 329 ntBASIC5.25□□□□□ -1.57
NcanP55066 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NcanP55066 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.25□□□□□ -1.57
NcanP55066 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.25□□□□□ -1.57
NcanP55066 AC164883.9-201ENSMUST00000228042 399 ntBASIC5.25□□□□□ -1.57
NcanP55066 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
NcanP55066 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.25□□□□□ -1.57
NcanP55066 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NcanP55066 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
NcanP55066 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
NcanP55066 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NcanP55066 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.25□□□□□ -1.57
NcanP55066 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.24□□□□□ -1.57
NcanP55066 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NcanP55066 AC154481.2-201ENSMUST00000222526 3175 ntBASIC5.24□□□□□ -1.57
NcanP55066 Gm12106-201ENSMUST00000116006 1200 ntBASIC5.24□□□□□ -1.57
NcanP55066 Gm12813-201ENSMUST00000119615 902 ntBASIC5.24□□□□□ -1.57
NcanP55066 Gm13532-201ENSMUST00000120373 240 ntBASIC5.24□□□□□ -1.57
NcanP55066 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NcanP55066 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC5.24□□□□□ -1.57
NcanP55066 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.24□□□□□ -1.57
NcanP55066 Gm17091-201ENSMUST00000163248 357 ntBASIC5.24□□□□□ -1.57
NcanP55066 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.24□□□□□ -1.57
NcanP55066 Gm27037-201ENSMUST00000182270 960 ntBASIC5.24□□□□□ -1.57
NcanP55066 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.24□□□□□ -1.57
NcanP55066 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NcanP55066 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.24□□□□□ -1.57
NcanP55066 Gm43316-201ENSMUST00000197252 1295 ntBASIC5.24□□□□□ -1.57
NcanP55066 Gm43655-201ENSMUST00000197367 222 ntBASIC5.24□□□□□ -1.57
NcanP55066 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
NcanP55066 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Gm17956-201ENSMUST00000199931 838 ntBASIC5.24□□□□□ -1.57
NcanP55066 Gm43895-201ENSMUST00000203219 855 ntBASIC5.24□□□□□ -1.57
NcanP55066 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
NcanP55066 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC5.24□□□□□ -1.57
NcanP55066 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.24□□□□□ -1.57
NcanP55066 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.24□□□□□ -1.57
NcanP55066 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.24□□□□□ -1.57
NcanP55066 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.24□□□□□ -1.57
NcanP55066 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
NcanP55066 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Gm42870-201ENSMUST00000199355 3470 ntBASIC5.24□□□□□ -1.57
NcanP55066 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NcanP55066 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.24□□□□□ -1.57
NcanP55066 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NcanP55066 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.23□□□□□ -1.57
NcanP55066 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
NcanP55066 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.23□□□□□ -1.57
NcanP55066 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.23□□□□□ -1.57
NcanP55066 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.23□□□□□ -1.57
NcanP55066 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.23□□□□□ -1.57
NcanP55066 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.23□□□□□ -1.57
NcanP55066 Gm12413-201ENSMUST00000121508 312 ntBASIC5.23□□□□□ -1.57
NcanP55066 Gm22986-201ENSMUST00000122753 130 ntBASIC5.23□□□□□ -1.57
NcanP55066 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NcanP55066 Gm23228-201ENSMUST00000157296 270 ntBASIC5.23□□□□□ -1.57
NcanP55066 Gm24251-201ENSMUST00000157324 114 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms