Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sox3P53784 Gm27688-201ENSMUST00000183634 91 ntBASIC4.63□□□□□ -1.67
Sox3P53784 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sox3P53784 Gm44852-201ENSMUST00000207950 369 ntBASIC4.63□□□□□ -1.67
Sox3P53784 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.63□□□□□ -1.67
Sox3P53784 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.63□□□□□ -1.67
Sox3P53784 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Sox3P53784 Gm23928-201ENSMUST00000082469 145 ntBASIC4.63□□□□□ -1.67
Sox3P53784 Gm23302-201ENSMUST00000082710 100 ntBASIC4.63□□□□□ -1.67
Sox3P53784 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Sox3P53784 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.63□□□□□ -1.67
Sox3P53784 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.63□□□□□ -1.67
Sox3P53784 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sox3P53784 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Sox3P53784 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Sox3P53784 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.62□□□□□ -1.67
Sox3P53784 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sox3P53784 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sox3P53784 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sox3P53784 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
Sox3P53784 Mir761-201ENSMUST00000103245 76 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.62□□□□□ -1.67
Sox3P53784 Gm15206-201ENSMUST00000119143 454 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm12820-201ENSMUST00000119233 342 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Sox3P53784 Gm6027-201ENSMUST00000121467 756 ntBASIC4.62□□□□□ -1.67
Sox3P53784 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Sox3P53784 Gm24534-201ENSMUST00000157949 291 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm23116-201ENSMUST00000158481 67 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sox3P53784 Gm27568-201ENSMUST00000184220 99 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.62□□□□□ -1.67
Sox3P53784 Gm18181-201ENSMUST00000190670 736 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm28877-201ENSMUST00000191349 604 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Sox3P53784 Gm42579-201ENSMUST00000200512 734 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm43036-201ENSMUST00000200594 373 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm44650-201ENSMUST00000206929 194 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sox3P53784 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm18899-201ENSMUST00000217663 546 ntBASIC4.62□□□□□ -1.67
Sox3P53784 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.62□□□□□ -1.67
Sox3P53784 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.62□□□□□ -1.67
Sox3P53784 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sox3P53784 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Sox3P53784 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Sox3P53784 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sox3P53784 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sox3P53784 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Sox3P53784 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.62□□□□□ -1.67
Sox3P53784 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
Sox3P53784 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox3P53784 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
Sox3P53784 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Sox3P53784 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox3P53784 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox3P53784 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Sox3P53784 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sox3P53784 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sox3P53784 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Sox3P53784 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Sox3P53784 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Sox3P53784 Gm12717-201ENSMUST00000118427 983 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm12704-201ENSMUST00000119789 464 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm6542-201ENSMUST00000153606 772 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.61□□□□□ -1.67
Sox3P53784 Gm22885-201ENSMUST00000157410 107 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm24961-201ENSMUST00000157918 184 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm26404-201ENSMUST00000158498 109 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm17081-201ENSMUST00000167363 478 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm27976-201ENSMUST00000183635 162 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Mir6374-201ENSMUST00000184003 107 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.61□□□□□ -1.67
Sox3P53784 Gm8599-201ENSMUST00000193033 457 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm9134-201ENSMUST00000193186 551 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.61□□□□□ -1.67
Sox3P53784 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.61□□□□□ -1.67
Sox3P53784 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.61□□□□□ -1.67
Sox3P53784 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.61□□□□□ -1.67
Sox3P53784 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.61□□□□□ -1.67
Sox3P53784 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Mecom-201ENSMUST00000061088 348 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Snord22-201ENSMUST00000083153 126 ntBASIC4.61□□□□□ -1.67
Sox3P53784 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Sox3P53784 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms