Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cux1P53564 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cux1P53564 Gm43871-201ENSMUST00000204931 1955 ntBASIC6.99□□□□□ -1.29
Cux1P53564 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Cux1P53564 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC6.99□□□□□ -1.29
Cux1P53564 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.99□□□□□ -1.29
Cux1P53564 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.99□□□□□ -1.29
Cux1P53564 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Cux1P53564 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC6.99□□□□□ -1.29
Cux1P53564 AC165283.1-201ENSMUST00000223390 307 ntBASIC6.99□□□□□ -1.29
Cux1P53564 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Cux1P53564 Gm38106-201ENSMUST00000194107 2534 ntBASIC6.99□□□□□ -1.29
Cux1P53564 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.99□□□□□ -1.29
Cux1P53564 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cux1P53564 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Cux1P53564 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Cux1P53564 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Cux1P53564 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC6.98□□□□□ -1.29
Cux1P53564 Mir129b-201ENSMUST00000197461 65 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Gm18452-201ENSMUST00000202968 1111 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Gm5876-201ENSMUST00000203735 243 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC6.98□□□□□ -1.29
Cux1P53564 CT030194.1-201ENSMUST00000225507 532 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Cux1P53564 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cux1P53564 Gm37268-201ENSMUST00000192254 2614 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Cux1P53564 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.98□□□□□ -1.29
Cux1P53564 Gm45211-201ENSMUST00000206208 2650 ntBASIC6.98□□□□□ -1.29
Cux1P53564 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Cux1P53564 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.98□□□□□ -1.29
Cux1P53564 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Cux1P53564 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cux1P53564 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Cux1P53564 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cux1P53564 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cux1P53564 Gm15038-201ENSMUST00000122144 296 ntBASIC6.97□□□□□ -1.29
Cux1P53564 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Cux1P53564 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC6.97□□□□□ -1.29
Cux1P53564 Gm5473-201ENSMUST00000179326 642 ntBASIC6.97□□□□□ -1.29
Cux1P53564 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.97□□□□□ -1.29
Cux1P53564 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC6.97□□□□□ -1.29
Cux1P53564 Gm18877-201ENSMUST00000207706 539 ntBASIC6.97□□□□□ -1.29
Cux1P53564 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.97□□□□□ -1.29
Cux1P53564 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Cux1P53564 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Cux1P53564 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC6.97□□□□□ -1.29
Cux1P53564 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Cux1P53564 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cux1P53564 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Cux1P53564 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cux1P53564 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
Cux1P53564 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Cux1P53564 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Cux1P53564 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Cux1P53564 Mir551b-201ENSMUST00000102165 98 ntBASIC6.96□□□□□ -1.29
Cux1P53564 Gm25169-201ENSMUST00000104190 129 ntBASIC6.96□□□□□ -1.29
Cux1P53564 Gm15151-201ENSMUST00000117106 177 ntBASIC6.96□□□□□ -1.29
Cux1P53564 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Cux1P53564 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Cux1P53564 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.96□□□□□ -1.29
Cux1P53564 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cux1P53564 Mir5106-201ENSMUST00000174936 73 ntBASIC6.96□□□□□ -1.29
Cux1P53564 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.96□□□□□ -1.29
Cux1P53564 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cux1P53564 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Cux1P53564 Snord59a-201ENSMUST00000082844 74 ntBASIC6.96□□□□□ -1.29
Cux1P53564 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Cux1P53564 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cux1P53564 Gm37831-201ENSMUST00000191685 1787 ntBASIC6.96□□□□□ -1.3
Cux1P53564 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Cux1P53564 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cux1P53564 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cux1P53564 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Cux1P53564 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cux1P53564 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Cux1P53564 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Cux1P53564 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cux1P53564 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cux1P53564 Gm7449-201ENSMUST00000194393 663 ntBASIC6.96□□□□□ -1.3
Cux1P53564 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.96□□□□□ -1.3
Cux1P53564 Gm25592-201ENSMUST00000082635 131 ntBASIC6.96□□□□□ -1.3
Cux1P53564 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cux1P53564 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Cux1P53564 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cux1P53564 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cux1P53564 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cux1P53564 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Cux1P53564 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cux1P53564 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.95□□□□□ -1.3
Cux1P53564 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.95□□□□□ -1.3
Cux1P53564 Gm37501-201ENSMUST00000192830 691 ntBASIC6.95□□□□□ -1.3
Cux1P53564 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cux1P53564 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.95□□□□□ -1.3
Cux1P53564 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cux1P53564 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cux1P53564 Gm7451-201ENSMUST00000208382 1392 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms