Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 AC154328.1-201ENSMUST00000225875 307 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col18a1P39061 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Col18a1P39061 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col18a1P39061 AC124746.1-201ENSMUST00000227535 1300 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.83□□□□□ -1.32
Col18a1P39061 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Col18a1P39061 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Col18a1P39061 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm12413-201ENSMUST00000121508 312 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm14122-201ENSMUST00000122076 973 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC6.82□□□□□ -1.32
Col18a1P39061 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm43015-201ENSMUST00000199087 565 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 AC156790.5-201ENSMUST00000227075 231 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col18a1P39061 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Col18a1P39061 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 AC131743.1-201ENSMUST00000222138 4024 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm15752-201ENSMUST00000117427 394 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm12717-201ENSMUST00000118427 983 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm11359-201ENSMUST00000120039 567 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 n-R5s61-201ENSMUST00000122711 118 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.82□□□□□ -1.32
Col18a1P39061 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm16563-201ENSMUST00000162673 423 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col18a1P39061 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 AC192333.1-201ENSMUST00000224573 376 ntBASIC6.82□□□□□ -1.32
Col18a1P39061 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col18a1P39061 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col18a1P39061 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
Col18a1P39061 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC6.81□□□□□ -1.32
Col18a1P39061 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Col18a1P39061 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Gm24544-201ENSMUST00000103862 110 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Gm23481-201ENSMUST00000104173 131 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Gm14786-201ENSMUST00000117127 944 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Gm15421-202ENSMUST00000118224 399 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Gm6382-201ENSMUST00000118873 942 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Gm6584-201ENSMUST00000119671 447 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC6.81□□□□□ -1.32
Col18a1P39061 Gm23022-201ENSMUST00000158768 180 ntBASIC6.81□□□□□ -1.32
Col18a1P39061 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col18a1P39061 Amd-ps5-201ENSMUST00000198406 989 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms