Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm20885-201ENSMUST00000190192 654 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm29740-201ENSMUST00000193182 655 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm36866-201ENSMUST00000193343 657 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm36047-201ENSMUST00000193659 657 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm7897-201ENSMUST00000193981 554 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm20857-201ENSMUST00000194766 657 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm20858-201ENSMUST00000195459 657 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.88□□□□□ -1.47
Usp4P35123 Gm44058-201ENSMUST00000204335 467 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm44604-201ENSMUST00000205475 496 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm19196-201ENSMUST00000209258 357 ntBASIC5.88□□□□□ -1.47
Usp4P35123 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.88□□□□□ -1.47
Usp4P35123 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Usp4P35123 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm5649-201ENSMUST00000217918 951 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.88□□□□□ -1.47
Usp4P35123 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Usp4P35123 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Usp4P35123 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Usp4P35123 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Usp4P35123 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Usp4P35123 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.88□□□□□ -1.47
Usp4P35123 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Usp4P35123 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Usp4P35123 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm12230-201ENSMUST00000118301 454 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Gm12901-201ENSMUST00000118690 532 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Gm15331-201ENSMUST00000120225 385 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.87□□□□□ -1.47
Usp4P35123 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Gm25826-201ENSMUST00000157090 137 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Usp4P35123 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm17953-201ENSMUST00000192061 667 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Gm6261-201ENSMUST00000204707 760 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.87□□□□□ -1.47
Usp4P35123 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Gm46223-201ENSMUST00000215196 675 ntBASIC5.87□□□□□ -1.47
Usp4P35123 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.87□□□□□ -1.47
Usp4P35123 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.87□□□□□ -1.47
Usp4P35123 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.87□□□□□ -1.47
Usp4P35123 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm10794-201ENSMUST00000099624 207 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Usp4P35123 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.87□□□□□ -1.47
Usp4P35123 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.87□□□□□ -1.47
Usp4P35123 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.87□□□□□ -1.47
Usp4P35123 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.87□□□□□ -1.47
Usp4P35123 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp4P35123 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp4P35123 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.86□□□□□ -1.47
Usp4P35123 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Usp4P35123 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Usp4P35123 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.86□□□□□ -1.47
Usp4P35123 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.86□□□□□ -1.47
Usp4P35123 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms