Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm36998-201ENSMUST00000193205 704 ntBASIC4.25□□□□□ -1.73
P20040 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Gm43276-201ENSMUST00000199712 364 ntBASIC4.25□□□□□ -1.73
P20040 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.25□□□□□ -1.73
P20040 Gm20997-201ENSMUST00000205148 231 ntBASIC4.25□□□□□ -1.73
P20040 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.25□□□□□ -1.73
P20040 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.25□□□□□ -1.73
P20040 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.25□□□□□ -1.73
P20040 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.25□□□□□ -1.73
P20040 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.25□□□□□ -1.73
P20040 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.25□□□□□ -1.73
P20040 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.25□□□□□ -1.73
P20040 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.25□□□□□ -1.73
P20040 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
P20040 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
P20040 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.25□□□□□ -1.73
P20040 Gm23796-201ENSMUST00000084011 160 ntBASIC4.25□□□□□ -1.73
P20040 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
P20040 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC4.25□□□□□ -1.73
P20040 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
P20040 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
P20040 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
P20040 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
P20040 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
P20040 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.24□□□□□ -1.73
P20040 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
P20040 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
P20040 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
P20040 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
P20040 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
P20040 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
P20040 Gm24578-201ENSMUST00000103970 129 ntBASIC4.24□□□□□ -1.73
P20040 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.24□□□□□ -1.73
P20040 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.24□□□□□ -1.73
P20040 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.24□□□□□ -1.73
P20040 Gm15766-201ENSMUST00000118025 813 ntBASIC4.24□□□□□ -1.73
P20040 Gm14861-201ENSMUST00000119451 455 ntBASIC4.24□□□□□ -1.73
P20040 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.24□□□□□ -1.73
P20040 Gm23546-201ENSMUST00000158211 137 ntBASIC4.24□□□□□ -1.73
P20040 Gm22158-201ENSMUST00000158411 126 ntBASIC4.24□□□□□ -1.73
P20040 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
P20040 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Gm17081-201ENSMUST00000167363 478 ntBASIC4.24□□□□□ -1.73
P20040 Gm17086-201ENSMUST00000171346 484 ntBASIC4.24□□□□□ -1.73
P20040 Gm17152-201ENSMUST00000172430 535 ntBASIC4.24□□□□□ -1.73
P20040 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC4.24□□□□□ -1.73
P20040 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
P20040 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.24□□□□□ -1.73
P20040 Gm37682-201ENSMUST00000191776 522 ntBASIC4.24□□□□□ -1.73
P20040 Gm9442-201ENSMUST00000194242 319 ntBASIC4.24□□□□□ -1.73
P20040 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.24□□□□□ -1.73
P20040 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.24□□□□□ -1.73
P20040 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.24□□□□□ -1.73
P20040 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
P20040 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
P20040 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.24□□□□□ -1.73
P20040 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.24□□□□□ -1.73
P20040 AC156950.1-201ENSMUST00000219604 456 ntBASIC4.24□□□□□ -1.73
P20040 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.24□□□□□ -1.73
P20040 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.24□□□□□ -1.73
P20040 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
P20040 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
P20040 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
P20040 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
P20040 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.24□□□□□ -1.73
P20040 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
P20040 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
P20040 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.24□□□□□ -1.73
P20040 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.24□□□□□ -1.73
P20040 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.24□□□□□ -1.73
P20040 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
P20040 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
P20040 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
P20040 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms