Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm38125-201ENSMUST00000194136 3438 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC3.84□□□□□ -1.79
Sdc1P18828 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sdc1P18828 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm15603-201ENSMUST00000119252 492 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm5924-201ENSMUST00000132554 871 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC3.84□□□□□ -1.79
Sdc1P18828 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm25332-201ENSMUST00000158038 105 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm18522-201ENSMUST00000173947 650 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.84□□□□□ -1.79
Sdc1P18828 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm4557-201ENSMUST00000185826 907 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm4526-201ENSMUST00000186039 920 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm8708-201ENSMUST00000188500 906 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm37430-201ENSMUST00000193039 196 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm38283-201ENSMUST00000193041 695 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm22897-201ENSMUST00000197860 128 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm42542-201ENSMUST00000197978 268 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm43136-201ENSMUST00000200403 636 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sdc1P18828 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC3.84□□□□□ -1.79
Sdc1P18828 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm8613-201ENSMUST00000220383 1077 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 AC174082.2-201ENSMUST00000222094 543 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 AC168056.2-201ENSMUST00000223591 269 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 AC156802.1-201ENSMUST00000223623 579 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 AC154556.1-201ENSMUST00000224587 885 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sdc1P18828 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 n-R5s170-201ENSMUST00000083726 113 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm25005-201ENSMUST00000083812 156 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Gm22351-201ENSMUST00000083925 107 ntBASIC3.84□□□□□ -1.79
Sdc1P18828 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sdc1P18828 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Sdc1P18828 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC3.84□□□□□ -1.79
Sdc1P18828 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Sdc1P18828 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Sdc1P18828 Gm45235-201ENSMUST00000208016 4465 ntBASIC3.84□□□□□ -1.8
Sdc1P18828 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Sdc1P18828 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Sdc1P18828 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm22231-201ENSMUST00000101027 73 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm24142-201ENSMUST00000101960 107 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Mir466f-4-201ENSMUST00000116930 121 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm8202-201ENSMUST00000117682 310 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm14586-201ENSMUST00000119571 408 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm12564-201ENSMUST00000119860 321 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm11825-201ENSMUST00000120710 736 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm13452-201ENSMUST00000120896 1097 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm7670-201ENSMUST00000121272 641 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm13009-201ENSMUST00000121307 267 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm22600-201ENSMUST00000157598 269 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC3.83□□□□□ -1.8
Sdc1P18828 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm15143-201ENSMUST00000178180 714 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm21877-201ENSMUST00000185640 694 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm28625-201ENSMUST00000188309 205 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm2623-201ENSMUST00000199229 286 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm43028-201ENSMUST00000202561 481 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC3.83□□□□□ -1.8
Sdc1P18828 Gm4803-201ENSMUST00000218729 1279 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 AC165953.1-201ENSMUST00000226386 357 ntBASIC3.83□□□□□ -1.8
Sdc1P18828 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Sdc1P18828 Olfr881-201ENSMUST00000074611 948 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms