Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 Gm46998-201ENSMUST00000221444 330 ntBASIC5.38□□□□□ -1.55
Col1a1P11087 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Col1a1P11087 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col1a1P11087 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col1a1P11087 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.37□□□□□ -1.55
Col1a1P11087 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col1a1P11087 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Col1a1P11087 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col1a1P11087 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Col1a1P11087 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col1a1P11087 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Col1a1P11087 Gm26075-201ENSMUST00000104062 121 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Gm14103-201ENSMUST00000119075 366 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Gm4914-201ENSMUST00000119757 459 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Gm28471-201ENSMUST00000185994 615 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Gm5284-201ENSMUST00000199053 903 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.37□□□□□ -1.55
Col1a1P11087 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col1a1P11087 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col1a1P11087 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col1a1P11087 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col1a1P11087 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col1a1P11087 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col1a1P11087 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col1a1P11087 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col1a1P11087 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col1a1P11087 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.36□□□□□ -1.55
Col1a1P11087 Gm24544-201ENSMUST00000103862 110 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Gm14575-201ENSMUST00000117210 560 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Gm14587-201ENSMUST00000121714 658 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col1a1P11087 Gm25965-201ENSMUST00000157170 93 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Gm23228-201ENSMUST00000157296 270 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Gm37614-201ENSMUST00000195645 210 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col1a1P11087 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.36□□□□□ -1.55
Col1a1P11087 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.36□□□□□ -1.55
Col1a1P11087 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Col1a1P11087 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col1a1P11087 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Col1a1P11087 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col1a1P11087 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col1a1P11087 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Col1a1P11087 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Col1a1P11087 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Col1a1P11087 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Col1a1P11087 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm12813-201ENSMUST00000119615 902 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Gm22588-201ENSMUST00000157510 140 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Gm3339-201ENSMUST00000163462 475 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm37700-201ENSMUST00000192617 965 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Gm5876-201ENSMUST00000203735 243 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Gm45171-201ENSMUST00000206360 736 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.35□□□□□ -1.55
Col1a1P11087 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm3213-201ENSMUST00000219296 441 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Col1a1P11087 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Col1a1P11087 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.35□□□□□ -1.55
Col1a1P11087 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Col1a1P11087 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Col1a1P11087 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col1a1P11087 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col1a1P11087 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col1a1P11087 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.34□□□□□ -1.55
Col1a1P11087 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col1a1P11087 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col1a1P11087 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms