Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm24640-201ENSMUST00000116949 126 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm22626-201ENSMUST00000116990 126 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm11796-201ENSMUST00000120208 972 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm22482-201ENSMUST00000122563 359 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm7846-201ENSMUST00000145844 274 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm22381-201ENSMUST00000158186 107 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm22132-201ENSMUST00000175316 100 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm24761-201ENSMUST00000179589 127 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm24488-201ENSMUST00000179934 127 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm25701-201ENSMUST00000179988 127 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm26431-201ENSMUST00000180199 127 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm27028-201ENSMUST00000182303 399 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Mir8097-201ENSMUST00000185150 119 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC5.39□□□□□ -1.55
Hoxd3P09027 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm29475-201ENSMUST00000190767 312 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm8454-201ENSMUST00000196980 811 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm43212-201ENSMUST00000198208 394 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm19131-201ENSMUST00000203408 789 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm17822-201ENSMUST00000204307 351 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm45146-201ENSMUST00000207108 221 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm18103-201ENSMUST00000216621 779 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm3678-201ENSMUST00000218888 492 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm7822-201ENSMUST00000222433 581 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Mir296-201ENSMUST00000083587 79 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hoxd3P09027 Gm42898-201ENSMUST00000200370 3073 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Hoxd3P09027 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Hoxd3P09027 CT009757.6-201ENSMUST00000220661 2312 ntBASIC5.39□□□□□ -1.55
Hoxd3P09027 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm12871-201ENSMUST00000118758 438 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm8217-201ENSMUST00000119136 465 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm15959-201ENSMUST00000121724 368 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm11581-201ENSMUST00000122024 763 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm15187-201ENSMUST00000122329 264 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm15212-201ENSMUST00000122403 466 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm9672-201ENSMUST00000166437 425 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm23660-201ENSMUST00000178362 79 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm24088-201ENSMUST00000179100 79 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm22448-201ENSMUST00000179254 107 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm28744-201ENSMUST00000189939 340 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm38030-201ENSMUST00000192376 475 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.38□□□□□ -1.55
Hoxd3P09027 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hoxd3P09027 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms