Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm8790-201ENSMUST00000194108 322 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Trbv11-201ENSMUST00000194354 260 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Gm29793-201ENSMUST00000202874 460 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Gm26165-201ENSMUST00000083791 138 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col4a6B1AVK5 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm7449-201ENSMUST00000194393 663 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm44754-201ENSMUST00000208155 400 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm45458-201ENSMUST00000209900 522 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm42611-201ENSMUST00000199446 3407 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm22269-201ENSMUST00000104002 130 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm25168-201ENSMUST00000104189 132 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Snora64-201ENSMUST00000104521 134 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm12897-201ENSMUST00000120341 250 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm37659-201ENSMUST00000194574 111 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Gm46998-201ENSMUST00000221444 330 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Snord59a-201ENSMUST00000082844 74 ntBASIC4.77□□□□□ -1.65
Col4a6B1AVK5 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm15076-201ENSMUST00000117076 474 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm13484-201ENSMUST00000120738 412 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm18828-202ENSMUST00000181035 310 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm38201-201ENSMUST00000192143 387 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm43895-201ENSMUST00000203219 855 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm17780-201ENSMUST00000207142 612 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm10042-201ENSMUST00000079884 78 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.76□□□□□ -1.65
Col4a6B1AVK5 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
Col4a6B1AVK5 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col4a6B1AVK5 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col4a6B1AVK5 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms