Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm22473-201ENSMUST00000104114 132 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm14603-201ENSMUST00000121275 448 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm45845-201ENSMUST00000207326 582 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm5379-201ENSMUST00000120973 826 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm36998-201ENSMUST00000193205 704 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm18877-201ENSMUST00000207706 539 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC4.72□□□□□ -1.65
Scn1aA2APX8 Gm272-201ENSMUST00000222073 919 ntBASIC4.72□□□□□ -1.65
Scn1aA2APX8 Synpr-207ENSMUST00000223583 3362 ntBASIC4.71□□□□□ -1.65
Scn1aA2APX8 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.71□□□□□ -1.65
Scn1aA2APX8 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.71□□□□□ -1.65
Scn1aA2APX8 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.71□□□□□ -1.65
Scn1aA2APX8 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.71□□□□□ -1.66
Scn1aA2APX8 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.71□□□□□ -1.66
Scn1aA2APX8 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Mir6960-201ENSMUST00000183449 61 ntBASIC4.71□□□□□ -1.66
Scn1aA2APX8 Mir7028-201ENSMUST00000185016 64 ntBASIC4.71□□□□□ -1.66
Scn1aA2APX8 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.71□□□□□ -1.66
Scn1aA2APX8 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.71□□□□□ -1.66
Scn1aA2APX8 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scn1aA2APX8 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm24125-201ENSMUST00000104105 137 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm8129-201ENSMUST00000118230 213 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm8200-201ENSMUST00000122390 222 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm14916-201ENSMUST00000121904 204 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm27896-201ENSMUST00000175162 317 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm16378-201ENSMUST00000179168 342 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm18181-201ENSMUST00000190670 736 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm38150-201ENSMUST00000192996 452 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm37272-201ENSMUST00000193401 488 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.7□□□□□ -1.66
Scn1aA2APX8 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.7□□□□□ -1.66
Scn1aA2APX8 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scn1aA2APX8 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.69□□□□□ -1.66
Scn1aA2APX8 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms